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Information for unigene UN42594

FASTA Sequence
Unigene ID: UN42594Length: 880 SSR 
GGGAGAGGCTCTTCCGTAGTTCCACCCGCCCTTCACGGCGGATCCGCCGTGAAGGAGCCGAGGTATAGAGGCGTCAGGAAGAGACC
TTGGGGCCGTTTCGCCGCCGAGATCCGCGACCCCTTGAAGAAATCTCGCGTCTGGCTCGGCACTTTCGACTCCGCCGTCGAAGCCG
CACGCGCCTACGACGCAGCCGCTCGCAACCTCCGCGGCTCCAAGGCCAAAACCAACTTCCCCCTCGACTGTTCCCCTTCCTCTCCT
CTCCGACCGCTCAATTACCAGAACCAGATGGATCCGTTTATGGACCACCGGTTATACGGCGGAGGAGGAGGAGGAGGTGGTGGTGG
TGGTAGTTTCCAGGAGCAGCAGGTTATCAGTCGTCCGGCGAGCAGCAGCTTGAGCAGCACGGTGAAATCGTGCAGCGGACCGAGAC
CGGCGGCGAAGGCGACGAAGAGGTATCCGAGGACTCCGCCGGTGGCGCCGGAGGATTGTCACAGCGACTGCGATTCGTCGTCGTCG
GTGATCGACGACGGAGACGATATAGCGTCGTCGTCTTCGCGGCTGCGGAAAGCGCCGTTTCTGTTTGATCTTAATTTGCCGCCGTT
GGATGGTGTTGTTGACTTGTTCGCTGACGATCTCCACTGCACCGATCTACGTCTTTGATTTTGCTTTTGCTTTTTATTACCACGAT
GCAAAGGAAGATGATGATGACGAGGATATAAAGAGAGAGATAGAGAGAGGTTGTGTTGAGATCTGTTTACTGTAAGAACCAGATCT
GAGTTTCATTTGTCTGTTTCTTATTTAAGATCAACCCTTTGTTACATGTAACATTTCTATAGCTGATGATGATGATGATGAATTGA
TGATTCTCAATGATTCTAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894264 ATERF3/ERF3 [Arabidopsis lyrata subsp. lyrata]7054e-072
NP_175479 ethylene-responsive transcription factor 3 [Arabidopsis thaliana]6866e-070
XP_002531192 Ethylene-responsive transcription factor, putative [Ricinus communis]5962e-059
ACD87818 putative ethylene responsive factor [Vicia faba]5772e-057
NP_188666 ethylene-responsive transcription factor 7 [Arabidopsis thaliana]5729e-057

Swiss-Prot top hits (Blast detail)Scoree value
O80339 Ethylene-responsive transcription factor 36863e-071
Q9LDE4 Ethylene-responsive transcription factor 75724e-058
Q9SXS8 Ethylene-responsive transcription factor 35412e-054
Q9MAI5 Ethylene-responsive transcription factor 82831e-024
Q40477 Ethylene-responsive transcription factor 42751e-023

TrEMBL top hits (Blast detail)Scoree value
C0SV01 Putative uncharacterized protein At1g50640 (Fragment)6864e-070
B9SYX3 Ethylene-responsive transcription factor, putative5961e-059
D2CPV4 Putative ethylene responsive factor5772e-057
Q5MJ54 AT-rich element binding factor 25726e-057
Q2QDF5 Ethylene-responsive element-binding factor5215e-051

Arabidopsis top hits (Blast detail)Scoree value
AT1G50640.1 ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription repressor6872e-072
AT3G20310.1 ERF7 (ETHYLINE RESPONSE FACTOR 7); DNA binding / protein binding / transcription factor/ transcription repressor5724e-059
AT1G53170.1 ERF8; DNA binding / transcription factor/ transcription repressor2831e-025
AT3G15210.1 ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4); DNA binding / protein binding / transcription factor/ transcription repressor2722e-024
AT5G44210.1 ERF9 (ERF DOMAIN PROTEIN 9); DNA binding / transcription factor/ transcription repressor2704e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  50%
 
201  50%

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