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Information for unigene UN42621
| FASTA Sequence |
| Unigene ID: UN42621 | Length: 828 |
SSR | | CTGTCGTTTCCCATTTCGAAACTCTCCTCTCCTCTCCTCTCCTGTTGTTAGGTGAGAAGAGGGACACCTTCCGATAAGTTAGTTGG
GGGGATTGAATTATCTCATTTCCAATTCCCCACATAGGCTTAGGCTAAGTTGGGGACACCAATGCTTTCTTGCTTGCTTTTTGTGT
GTGTGTGTGTGTGTGTGTGTGCCAGGTGTGGGGAGCACAGACGCAGAGATCACTGCAGAACTTCGAGATCGGTGGTGAGCGGGAGC
GTATGCCCCAACCTATCGTCCGCGCTTTCGGCGTCTTGAAGAAGTGCGCTGCCAAGGTAAACATGGAGTATGGACTTGATCCAACA
ATTGGGAAAGCGATAATGGAAGTAGCTGAGGGCAAACTCAATGATCATTTCCCCCCTTGTTGTTTGGCAAACTGGTAGTGGCACTC
AGAGAGAGTAACATGAATGCTAATGAGGTCATTGCTAACAGAGCAGCTCAGATTCTTGGTGGTGATAAATGTGTCCACCCTAATGA
CCATGTCAACCGTAACCTACTATCATGCACATTGCAGCTGCAACCGAGACTAATTCAAGGCTCATCCCTAGCTTGAAAACTTTGCA
TACCACTCTCGACTCTAAGTCCTTCGAGTTCAAAGATATTGTCAAAATCGGAAGAACTCACACTCAAGATGCTACTCCTTTGACCC
TAGCACAAGAATTCAGTGGCTATTCTACTCAAGTTAAGTATGGGCTTAATAGGGTCACATGCACTTTACCCCGCCTCTATCAGCTT
GCACAAGGTGGAACTGCTGTTGGAACAGGATTAAACACCAAGAAAGGGTTTGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_182273 fumarate hydratase, class II [Arabidopsis thaliana] | 482 | 2e-046 |
| BAH19491 AT2G47510 [Arabidopsis thaliana] | 482 | 2e-046 |
| XP_002880309 hypothetical protein ARALYDRAFT_483931 [Arabidopsis lyrata subsp. lyrata] | 482 | 2e-046 |
| AAB39989 fumarase [Arabidopsis thaliana] | 480 | 4e-046 |
| NP_199908 fumarate hydratase 2 [Arabidopsis thaliana] | 456 | 2e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P93033 Fumarate hydratase 1, mitochondrial | 482 | 1e-047 |
| Q9FI53 Fumarate hydratase 2, chloroplastic | 456 | 1e-044 |
| O17214 Probable fumarate hydratase, mitochondrial | 351 | 2e-032 |
| P55250 Fumarate hydratase, mitochondrial | 349 | 3e-032 |
| Q54VA2 Fumarate hydratase, mitochondrial | 340 | 3e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DFH4 AT2G47510 protein | 482 | 2e-046 |
| B3H477 Uncharacterized protein At5g50950.3 | 456 | 2e-043 |
| B9DFR5 AT5G50950 protein | 456 | 2e-043 |
| B9GSD7 Predicted protein | 450 | 8e-043 |
| B8AP09 Putative uncharacterized protein | 442 | 7e-042 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G47510.1 FUM1 (FUMARASE 1); catalytic/ fumarate hydratase | 482 | 1e-048 |
| AT2G47510.2 FUM1 (FUMARASE 1); catalytic/ fumarate hydratase | 482 | 1e-048 |
| AT5G50950.1 fumarate hydratase, putative / fumarase, putative | 456 | 1e-045 |
| AT5G50950.2 fumarate hydratase, putative / fumarase, putative | 456 | 1e-045 |
| AT5G50950.3 fumarate hydratase, putative / fumarase, putative | 456 | 1e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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