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Information for unigene UN42632

FASTA Sequence
Unigene ID: UN42632Length: 879 SSR 
GAAACTCCTCCCGAATCTCTTCTTCTCCCATCTCCGATTCGAAATCCAAATGGGAGAGGAAGTAAGGATGAGCGATTACGACGTCT
CCGGCGACGGAGATAGGGTTCTCGAATGGGAGATGGGGCTACCTAGCGACGACGATTTGACATCTCTCTCCTACTCTCTGATTCCT
CCGAATCTCGCCATGGCTTTCAGTATAACTCCAGAGAAGAGCCGCACCATCGAAGACGTGAACCGCGCATCGGAGACGACCTTCTC
CTCGCTCCGCAGCGGCGGATCTTCAGGTCTCAACACCTCTTCCTCTAACAACAACAACAACAACAGCGTCGCGGCGGAGGAAGAGG
AGGATGAGGAGGAGGATCGAGTCGGATCGAGCAGCCCCGGATCGGACTCGAAGAAACAGAAGACATCCGGCGACGGCGTGGATCTC
TCCCCGTCGGCGGCGGCGGCGGAGGAGGGAGATTCGGGGACTGAAGATCCAACCGGGAAGACGCTGAAACGACCGCGTTTAGTGTG
GACGCCGCAGCTGCACAAGAGGTTCGTCGACGTGGTGGCTCACCTAGGGGTCAAGAACGCGGTGCCGAAGACGATTATGCAGCTGA
TGAACGTGGAAGGGTTGACCCGGGAGAACGTCGCGTCTCACCTCCAGAAGTACAGGCTGTACCTCAAACGGATGCAGGGGCTGACG
ACGGAAGGTCCGTCTTCGTCCGATAAGCTCTTCTCCTCGACCCCCGTGCCTCCACAGAGCTTCCAAGAACTCGGAGGAGGCGGTAA
CGGTAACGGTAACGGCCAAGGGAATGTATCGGCGGGTGTGCCGTACGGAGCAGCGCCGCAGCCGCCGATGATGCAGATGCCTGTGT
ATGCGCATCATATGGGTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875796 hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp. lyrata]10872e-116
NP_190248 protein phytoclock 1 [Arabidopsis thaliana]10486e-112
NP_001190022 protein phytoclock 1 [Arabidopsis thaliana]10486e-112
BAH20438 AT3G46640 [Arabidopsis thaliana]10451e-111
CAN81044 hypothetical protein VITISV_006762 [Vitis vinifera]7601e-078

Swiss-Prot top hits (Blast detail)Scoree value
Q940D0 Two-component response regulator ARR12606e-022
Q9FGT7 Two-component response regulator ARR182482e-020
Q9ZWJ9 Two-component response regulator ARR22472e-020
P62598 Two-component response regulator ARR122302e-018
Q8L9Y3 Two-component response regulator ARR142194e-017

TrEMBL top hits (Blast detail)Scoree value
Q9SNB4 At3g4664010791e-115
B9DI71 AT3G46640 protein10762e-115
A5BDT9 Putative uncharacterized protein7601e-078
B9S3G5 DNA binding protein, putative6928e-071
Q8LA15 ARR1 protein-like5565e-055

Arabidopsis top hits (Blast detail)Scoree value
AT3G46640.1 PCL1 (PHYTOCLOCK 1); DNA binding / transcription factor10796e-118
AT3G46640.2 PCL1 (PHYTOCLOCK 1); DNA binding / transcription factor10796e-118
AT3G10760.1 myb family transcription factor3743e-036
AT5G05090.1 myb family transcription factor3691e-035
AT2G40970.1 myb family transcription factor3171e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  100%

Unigene MembersMember information