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Information for unigene UN42636
| FASTA Sequence |
| Unigene ID: UN42636 | Length: 845 |
SSR | | AGATTACTCTCTCCCCTCTCTTTATTTCACTTCAGCTTCACCGTGAAGAAGACGTCATTGCCAGATCTGTACTGCCTCACTCTTAA
AAACCTTCACATTCACGATCTGTCTGAACAGAGCTAATGAGTTCTGTCTGATCGCAAAACCTTAAAAAAAAAGAATCTTTTTTTTC
TTCTTCTTTTACTGTTGCCACCACACCAATGGCAATGCCACCTGGAAACGTTGCTCCTCCCGGAAACTGGATCCCGGACGGGAGAG
ACGGGTTTATCTCGTGGATTCGCGGGGAGTTCGCTGCGGCCAACGCCATCATCGATTCCCTCTGCCAGCATCTAGTGGCGATCGGG
GATCACAACGAGTACGAGGGGGTGGTCTCAGCCATCCAACACCGTCAATCGAGCTGGTCTCAGGTTCTCTATATGCAGCATTTTTT
CCCCATCGCAGATGTTTCTTACGCTCTAGACCAAGCTGCTTGGAAGCGGCAACAGAAGATGATGATGCCTCAAAGGCATTACAACT
CGGATCAGACTGTGAAATTTGGAGGAAGGAGATCATCAGGGCCTGGGTTTAACAAGCATTATAATCATGGTGGTGGTGGTGGTGGT
GGTTACAGAGGAGGTGAGACCATGGCGAGAAACGGGCATCGCTCGGATCCGGATGGACACAAGAGTGTAGCTAAGCTAGCGAGTTG
TGATAAGGCAGTATCTGATGTCGAGGAGAAGAGAGATGGTAGCGAGAAATTGAAGAGCGATGGTAAAGATGCGGAAGAATCTGAGT
CTACTGGTGCAGGAACTCAAGTTGAAATAGTGAACCGTAGTTGTTACTCGGCGTCTAAAGATAACAATCTC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_563957 hydroxyproline-rich glycoprotein-like protein [Arabidopsis thaliana] | 682 | 2e-069 |
| AAF79247 F10B6.11 [Arabidopsis thaliana] | 682 | 2e-069 |
| BAH19958 AT1G14710 [Arabidopsis thaliana] | 682 | 2e-069 |
| XP_002892824 hypothetical protein ARALYDRAFT_471658 [Arabidopsis lyrata subsp. lyrata] | 634 | 6e-064 |
| XP_002311547 predicted protein [Populus trichocarpa] | 351 | 4e-031 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGU1 AT1G14710 protein | 682 | 1e-069 |
| Q9LQV9 F10B6.11 | 682 | 1e-069 |
| B9HJK1 Predicted protein (Fragment) | 351 | 3e-031 |
| A9PG91 Putative uncharacterized protein | 333 | 3e-029 |
| B9HVR5 Predicted protein | 320 | 1e-027 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G14710.1 hydroxyproline-rich glycoprotein family protein | 682 | 6e-072 |
| AT1G14710.2 hydroxyproline-rich glycoprotein family protein | 682 | 6e-072 |
| AT4G02940.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 201 | 4e-016 |
| AT2G48080.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 177 | 2e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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