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Information for unigene UN42640

FASTA Sequence
Unigene ID: UN42640Length: 878 SSR 
ATTTGAAGCGATATTTCTGATCTCGAGGAGATTCGCGCGAGAAGATAACTTTCTGGGGAAATATTTGACTCTCTGCTTAAAGGGGG
TGACCACCACAAGATCTTGAAAGATGGAAACAGATGATGATCTGTGTCAGAACAACTGGGGAGGCTCATCATCATCTTCTTCTTCC
AAATTGCGTGAGCCGGTATGCTTCACCTCACAACAGCACAAGTGGGAAGATGCTTCTATCTTGGATTACGAGATGGGTATGGATGA
GGAGCCAGTTTTTGACCACATGAAAGCTTCTTCAAGCCATGATAACAACAACAACAACAACAAGAGCAACGGTGTTCATTCTCATG
TTGATTTCCTCCAAGGCGTGAGGGCTCAAGCGTGGGATCCGAGGACTATGCTGAGCAATCTATCCTTTATGGAAGAGAAGATTCAC
GAGCTCCAGGATCTTGTTCATCTCATCGTTGGCCGAAACGGGCAGCTTCAAAGTCGTCAAGAACAGCTCATAACTACTGATCTTAC
TTCCATAATCATACAGCTGATTTCAACTGCAGGTAGTCTTCTTCCATCTGTTAAGCATAATAATATGTCTACTACTACAGCCCCCG
GTTCAGCCTTGTTCCCTTATCCAAGGGAGGCTAATAACCTTGCTTCACAGACCCTTAACAACAACAACAACAACTCTTGCGAGTTC
GATTTGCCTTTGCCTTTGCCTAAGCAGCCGAGTGTTGTTGAAGAGAGGGAAAGCCATGTTGTAGAAGAACATGAAATGAAAGACGA
AGATGACGTGGAGGAAGGAGAGAACCTTCTTCCCGGTTCTTACGAGATTCTGCAGCTCGAGAAAGAGGAGATCCTCGCTCCCCATA
CTCACTTCTGCACCATAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891100 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]8613e-090
BAF62149 C2-H2 zinc finger protein [Arabidopsis thaliana]7923e-082
NP_174697 protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Arabidopsis thaliana]7896e-082
AAM65531 zinc finger protein, putative [Arabidopsis thaliana]7896e-082
XP_002270196 PREDICTED: hypothetical protein [Vitis vinifera]5191e-050

Swiss-Prot top hits (Blast detail)Scoree value
Q9C8N5 Protein SENSITIVE TO PROTON RHIZOTOXICITY 18314e-088

TrEMBL top hits (Blast detail)Scoree value
A5BSF5 Putative uncharacterized protein5199e-051
B9MW64 Predicted protein5172e-050
B9SLH5 Putative uncharacterized protein5134e-050
B0YR09 C2-H2 zinc finger protein3971e-036
Q2V4J0 Uncharacterized protein At1g34370.33746e-034

Arabidopsis top hits (Blast detail)Scoree value
AT1G34370.2 STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding8314e-089
AT1G34370.1 STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding8314e-089
AT1G34370.3 STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding3743e-036

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  50%
 
211  50%

Unigene MembersMember information