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Information for unigene UN42661

FASTA Sequence
Unigene ID: UN42661Length: 839 SSR 
TTCTTCTTCTCTCTGTTCCCTTCAGTAATCTCCAACACCAATCGCTTCAGGTCGGTTCAGTCAAAGACGATTCACTAGAGGGTTAT
AATGCAAACATCTCAGAAACATCACACTGCAGCTGGACTTCACATGCTGTATCCTCAACCACACTGTTCACCTCAGTTTCAAATGA
TAGACAACAACAACAACAACAATGGCTCATCCAACGAAAGCTTCTTCACCCTCGAATCATCCGGTCCTCTTCCTTCCTATGACTCC
CCTTCCGTGAGCATCACATCTGCCCGGACTCCGTTCTCTCCTCACTCATGCATCTCTGATCCGCATCCTTCCCCTGAAAACGTCTA
CGGATCTCCCTTGAGCGCAGCGTCTTCCTACGTCTACGACGAAGCCGGGATCAAGAGCAAGATCCGTGAGCTTGAGGACTCCCTGC
TTAGCGGTGACACCAAAGTTGAAGAATACTCAGGCTTCAGCCCAGCTGCTGGGAAGTCATGGAACTGGGATGAGCTCTTGGCGTTG
ACTCCGCAGTTAGACTTGAAAGAAGTGCTAATGGAGGGGGCTCGCGCGGTCTCTGACGGTGATTTCGCTACAGCCTGTGGCTTCAT
CGACGTCCTGGAACAGATGGTGTCGGTCTCAGGGACTCCGGTCCAAAGGCTAGGTGCTTACATGGCGGAAGGGCTTAGAGCGAGGC
TCGAAGGCTCTGGAGGGAATATATACAGAGCCTTGAAGTGCAATGAACCGACGGGAAGGGAGCTCATGTCTTACATGGGAGTTCTC
TACGAGATCTGCCCTTACTGGAAGTTCGCGTACACGGCATCAAACGCTGCTATCTTGGAGCAACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33904 unnamed protein product [Thellungiella halophila]11256e-121
NP_193456 protein scarecrow-like 13 [Arabidopsis thaliana]10503e-112
Q9M0M5 RecName: Full=Scarecrow-like protein 13; Short=AtSCL13; AltName: Full=GRAS family protein 24; Short=AtGRAS-2410503e-112
AAL31902 AT4g17230/dl4650c [Arabidopsis thaliana]10469e-112
ABD65110 GRAS family transcription factor [Brassica oleracea]10073e-107

Swiss-Prot top hits (Blast detail)Scoree value
Q8H125 Scarecrow-like protein 53351e-030
Q9M0M5 Scarecrow-like protein 133342e-030
Q8GVE1 Chitin-inducible gibberellin-responsive protein 23134e-028
Q9LDL7 Scarecrow-like transcription factor PAT13082e-027
Q69VG1 Chitin-inducible gibberellin-responsive protein 12679e-023

TrEMBL top hits (Blast detail)Scoree value
Q2A9F1 GRAS family transcription factor10072e-107
B9IH45 GRAS family transcription factor5824e-058
B9HCV9 GRAS family transcription factor5691e-056
B9T7J9 Chitin-inducible gibberellin-responsive protein, putative5287e-052
C6TJ61 Putative uncharacterized protein4652e-044

Arabidopsis top hits (Blast detail)Scoree value
AT4G17230.1 SCL13 (Scarecrow-like 13); transcription factor10501e-114
AT1G50600.1 SCL5; transcription factor3351e-031
AT5G48150.1 PAT1 (phytochrome a signal transduction 1); signal transducer/ transcription factor3081e-028
AT5G48150.2 PAT1 (phytochrome a signal transduction 1); signal transducer/ transcription factor3081e-028
AT2G04890.1 SCL21 (SCARECROW-LIKE 21); transcription factor2605e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  100%

Unigene MembersMember information