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Information for unigene UN42663

FASTA Sequence
Unigene ID: UN42663Length: 930 SSR 
TTATTATTGAACATTTTGTTTCTCAATTAAAAAAAAAGAAGTTTTTTTCTCAATCTTCAACAAAATTTTACAGAATAGGTTTCATT
ATTACTACAAAGTTCCCACCATTTTCTTTGCATAAACATTAAAGAGCCATCAAGGTTCTTCATCATCATCATCATCATCAGCAATG
AAAGCTCTTCTACGTACACGACGTCTAGACTCTTGTTCATCAGAAGACTGATTGTTGTTCTCTTCATCTCTATCTCTAGATGATGT
TCCCGTCTCACCTTCATAGCTCTCTCCCCAAAGCCTTGAAGATCTTCTTCTCACACCTATATGAGACCTAGCTCTAGACGTACCAG
ACCAGCTACTACTACTCCTTGATCCTCCACCACTCGATTCTGGTCTAAACACACGGATGAGGAAGAACACCGTAAGCCAACCACCA
TCATCAAACGATAGAATACCATCATCATTGCTGCTTCTCTCTTCTCCTCCGAAAGAAGACTGGAGTGTGCTAAGCAAGTCCCCTAA
ATCCCTCTGCCTCTCTAGCCTCCTCCAGCTTCTCTGCCTCTCAGGATCAGCTTCCGATGGCCTTACCCCTGGATGCTGGAGCCTCG
CGTGCTTTCTCAGATCAGAGTAAGTTCCACTGAACTCACAACTCTCAGAAGAACAGCTCCTATGCTTCGCGTTCATGAAACCTCTA
GCATCTTCGACAGCCACCCATTCTTTTATATGTCCACGGCATAACGGACAAGTAAGCTTCGGTTTGGTTTTCTCTTGGTCTGTTAC
CTCATCAGACGCAGCCTCTTCTCTTAAATCTACAGTGGCAGAGCCTGAAGCTACACCACCACCACCTTCAGTCTCAGCTGGTGTCG
TCTGTTTAGAAGCTTTACGGTACTGATCGAAACAGTTGGAATGACGGTGGCTAGTGTCACACATGTACGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875291 hypothetical protein ARALYDRAFT_904770 [Arabidopsis lyrata subsp. lyrata]8391e-087
NP_566784 uncharacterized protein [Arabidopsis thaliana]7663e-079
XP_002524446 conserved hypothetical protein [Ricinus communis]7063e-072
XP_002285038 PREDICTED: hypothetical protein [Vitis vinifera]6983e-071
XP_002308310 predicted protein [Populus trichocarpa]6517e-066

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LUA0 AT3g25910/MPE11_67662e-079
B9SEM7 Putative uncharacterized protein7062e-072
B9H984 Predicted protein6515e-066
B9N5I9 Predicted protein5208e-051
C6TEK7 Putative uncharacterized protein3943e-036

Arabidopsis top hits (Blast detail)Scoree value
AT3G25910.1 zinc ion binding7803e-083
AT3G24740.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT3G25910.1); Has 135 Blast hits to 134 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3493e-033
AT3G24740.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT3G25910.1); Has 135 Blast hits to 134 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3493e-033
AT1G68140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT4G08460.2); Has 145 Blast hits to 136 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2696e-024
AT1G68140.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT4G08460.2); Has 157 Blast hits to 148 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 143; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).2696e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  50%
 
181  50%

Unigene MembersMember information