Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN42686

FASTA Sequence
Unigene ID: UN42686Length: 999 SSR 
AAGCTCTCTCTGGGATCATCGTACTGAAGAAGTCAAGTCTCTCACCAAAAACATAACTGTGGTGTGTTCTGATTGAAGAAGGAAAA
GTGTAAAGAGAGAAGCAGAAGGCGATCTCGCTACTCTGCCTGTCTGTCTGTGTGAATAAACCCAAAAGTTAAAGAAGAAATGTCAG
AAGGAGCAGCAGCAAAAAAGGCGGCATTCCTAGGGGCACTCGTTGTCTCATTCAAGGAGCAAATTCACGCTGATGTTCTCGTTCAT
CCTGGTGCTGATCATCATCATCATCATCATGCTCTCCCCATCCCTACCCACAAGGCCCTCCTCTCGTCAAGATCTAAGGTCTTCAG
GAACATGCTAGACTCCGATGAATGCAAGGCCTCTGCCGAGGAATCTATCACTCTCCCCGATTTGAACCACGATGAGCTCAACTCTC
TTCTCGAGTTCCTCTACTCCGGCAACCTACTTGCTCCTTACATCCAGTACCGAGCCCTCTATCTTGCTGCCGACAAATACGACATT
CCTTATCTCCAAGACGTTTGCCGCGACCATTTCATCGCTTCTCTCACCTCCAGGAACGTCCTTGACGTCCTGGAGCTCGCCAGCAT
TCCTTCCGACACCATCTTGAAATCCGCCGCCATCAACCATGTGGTTAAACATATGGAGGAAGTGGTGGTTCCCATGAAATACGAGA
CTTTTGTGCAGAGGAACCCCAATCTTGGCGTTGAGATCACCAGAGCTTATCTTAGAGAGACCAAAGCTCTAGCCAAAGACAACAAC
AGATCAACTGCTTCTATTCGCCCTCATTCTCGCATGTACTGACGATCAACCCAAACAGCTTCCCTAATATCTCACTTTGCTAAATG
TGATGATTATGCCCCTCCTCCTTCTTCTTTTTCTTTGAGTGAGAGAATTTGAAAATACTTGTTTTATGGATTTATTTCAAGGTGTT
GGTTGATGCCATATACAATATCAACCATATATATATATATATATTCTCTTGCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_171670 BTB/POZ domain-containing protein [Arabidopsis thaliana]8022e-083
AAQ22660 At3g01790 [Arabidopsis thaliana]8022e-083
XP_002889359 hypothetical protein ARALYDRAFT_887282 [Arabidopsis lyrata subsp. lyrata]6312e-063
CBI25397 unnamed protein product [Vitis vinifera]4635e-044
XP_002878074 hypothetical protein ARALYDRAFT_348708 [Arabidopsis lyrata subsp. lyrata]4627e-044

Swiss-Prot top hits (Blast detail)Scoree value
Q717B3 TD and POZ domain-containing protein 11702e-011
Q717B4 TD and POZ domain-containing protein 31693e-011
Q7T330 Speckle-type POZ protein1675e-011
Q0VCW1 Speckle-type POZ protein1631e-010
O43791 Speckle-type POZ protein1631e-010

TrEMBL top hits (Blast detail)Scoree value
Q7XA69 At3g017908022e-083
Q9LQ95 T1N6.2 protein8022e-083
Q9LYL9 At3g562304527e-043
B9N130 Predicted protein (Fragment)4482e-042
B9S4A7 Protein binding protein, putative4312e-040

Arabidopsis top hits (Blast detail)Scoree value
AT1G01640.1 speckle-type POZ protein-related8063e-086
AT1G01640.2 speckle-type POZ protein-related8063e-086
AT3G56230.1 speckle-type POZ protein-related4524e-045
AT2G40450.1 speckle-type POZ protein-related3162e-029
AT5G48510.1 speckle-type POZ protein-related3029e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  33%
 
102  67%

Unigene MembersMember information