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Information for unigene UN42694

FASTA Sequence
Unigene ID: UN42694Length: 601 SSR 
CTCCTCTCTCTCTCTCTCTCTCTCGTTCAAGAGCTAAAAGACGCCGCTCGTCTTCAAGGAAAGGTTAAGAAAATGAGTCGTGGAGG
TGCAGCTGTTGCCAAGGGGAAGAAGAAGGGAGTGTCCTTCTCCATTGACTGCTCGAAGCCTGTCGATGACAAGATCATGGAGATTG
CTTCCCTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGCGCTTGGTGATACTGTCACAATCACCCGTGAG
AAGAACAAGATCACTGTCACCTCTGATGGTCAATTCTCCAAGAGGTACCTCAAGTACTTGACAAAGAAGTACTTGAAGAAGCACAA
TGTGAGGGATTGGCTTAGAGTGATTGCGGCCAACAAGGACCGTAACCTCTACGAGTTGAGGTACTTCAACATTGCTGAGAACGAGG
GCGAGGAAGAAGACTAGAAGAGCTACTATACTCGTACCTTCTTGTTTCTGGTTGTTTTGTTTTCTGCTGCTCAGTACAATTTATCT
CCGTTCTTTTTTGGTGACAGATCTTATCTAGTTTTGGTCGAAGTTGACTCTTGTTATAGAGAGTTCGATAAAAAGTATTTTTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187207 60S ribosomal protein L22-2 [Arabidopsis thaliana]6173e-062
XP_002882425 60S ribosomal protein L22-2 [Arabidopsis lyrata subsp. lyrata]6102e-061
BAJ34418 unnamed protein product [Thellungiella halophila]6102e-061
NP_198129 60S ribosomal protein L22-3 [Arabidopsis thaliana]5975e-060
XP_002874346 60S ribosomal protein L22 [Arabidopsis lyrata subsp. lyrata]5903e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9M9W1 60S ribosomal protein L22-26171e-063
Q9FE58 60S ribosomal protein L22-35973e-061
Q9SRX7 Putative 60S ribosomal protein L22-14271e-041
P47198 60S ribosomal protein L223697e-035
Q4R5I3 60S ribosomal protein L223681e-034

TrEMBL top hits (Blast detail)Scoree value
Q0WRH6 60S ribosomal protein L22-like5974e-060
A5CBL0 Putative uncharacterized protein5714e-057
C6SVM3 Putative uncharacterized protein5633e-056
A9PCU0 Putative uncharacterized protein5624e-056
A9P9A4 Putative uncharacterized protein5607e-056

Arabidopsis top hits (Blast detail)Scoree value
AT3G05560.1 60S ribosomal protein L22-2 (RPL22B)6181e-064
AT3G05560.2 60S ribosomal protein L22-2 (RPL22B)6181e-064
AT3G05560.3 60S ribosomal protein L22-2 (RPL22B)6181e-064
AT5G27770.1 60S ribosomal protein L22 (RPL22C)5982e-062
AT1G02830.1 60S ribosomal protein L22 (RPL22A)4271e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
193  100%

Unigene MembersMember information