Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN42695

FASTA Sequence
Unigene ID: UN42695Length: 1052 SSR 
AAAACGCAGCCGTTTCAGAGAAACAGCATCACGACGACGACGGCAACGCTGCTACCTCCGCGTCGCCGGAGTTTAAGCTCGTTGGA
TTCTCCATCAGCGTCTCCAACGGCGCCGTTCCTTCATCCCCTCCTATCCTCCTAAACGACGCCGTTACGATCTCCGAGGTTAAACT
ATACGGCGACGTCGTCCTCCGTTACGTCAGTTACAACAAAGCCGTTACATCAGTTTTCCTCCCGAGATTCGAGCCTGTGGAAGATA
CGTCGTCGTTTCCACTAGACTACGGTATAACGCGTCTCGACCACGCCGTGGGGAACGTCCCGGAGCTCGTCCCAGCGTTAACTTAC
CTCGCAACGTTCACCGGCTTCCACCAGTTCGCTGAGTTCACAGCAGACGACGTGGGAACAGCCGAGAGCGGGTTGAACTCGGCGGT
TTTGGCAAACAACGACGAGACGGTGCTTCTGCCGATAAACGAGCCGGTTCACGGGACGAGGAGGAAGAGTCAGATCCAGACGTATC
TGGAGCACAACGAAGGCGCGGGGGTACAGCATCTGGCGCTGACGAGCGGAGACATATTCAGGACTCTGAGGGAGATGCGGAAGAGG
AGCGGTGTTGGAGGGTTCGACTTCATGCCTTCTCCTCCGCCTACTTACTACAAGAATCTCAAGAAACGGGTGGGAGATGTGCTTAG
TGAGGAAGAGATCAAGGAGTGTGAGGAGTTGGGGATTCTTGTGGATAGGGATGATCAAGGGACGTTGCTTCAGATCTTCACAAAAC
CACTTGGTGACAGGCCGACGATATTTATAGAGATAATACAGAGGATAGGATGCATGAAGAAAGATGGGGAAGGGAAAGTTTACCAG
AGTGGAGGATGTGGTGGTTTTGGCAAAGGCAACTTCTCTGAGCTCCTCAAGTCTATTGAAGAGTATGAGAAGACTCTTGAAGCTAA
ACAGCTTTTGGGGTGAAGAAGAAGAAGAAGGAACCAACTAAAGGGATTGTTGTAATTCATGTGTAAAACTTTGTATGTTGTTACAA
ATACTATTATCATTTTTAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABI63586 4-hydroxyphenylpyruvate dioxygenase [Brassica rapa subsp. pekinensis]13751e-149
XP_002892349 4-hydroxyphenylpyruvate dioxygenase [Arabidopsis lyrata subsp. lyrata]13372e-145
BAJ34100 unnamed protein product [Thellungiella halophila]13302e-144
NP_172144 4-hydroxyphenylpyruvate dioxygenase [Arabidopsis thaliana]13231e-143
P93836 RecName: Full=4-hydroxyphenylpyruvate dioxygenase; AltName: Full=4-hydroxyphenylpyruvic acid oxidase; Short=4HPPD; Short=HPD; Short=HPPDase13231e-143

Swiss-Prot top hits (Blast detail)Scoree value
P93836 4-hydroxyphenylpyruvate dioxygenase13234e-145
O23920 4-hydroxyphenylpyruvate dioxygenase11632e-126
Q9ARF9 4-hydroxyphenylpyruvate dioxygenase11202e-121
O48604 4-hydroxyphenylpyruvate dioxygenase10143e-109
Q6TGZ5 4-hydroxyphenylpyruvate dioxygenase3872e-036

TrEMBL top hits (Blast detail)Scoree value
Q09JZ2 4-hydroxyphenylpyruvate dioxygenase13757e-150
Q8L7E8 4-hydroxyphenylpyruvate dioxygenase HPD13183e-143
B9S300 4-hydroxyphenylpyruvate dioxygenase, putative12053e-130
O82449 P-hydroxyphenylpyruvate dioxygenase11964e-129
D2CZY0 4-hydroxyphenylpyruvate dioxygenase11911e-128

Arabidopsis top hits (Blast detail)Scoree value
AT1G06570.1 PDS1 (PHYTOENE DESATURATION 1); 4-hydroxyphenylpyruvate dioxygenase13243e-146
AT1G06570.2 PDS1 (PHYTOENE DESATURATION 1); 4-hydroxyphenylpyruvate dioxygenase10431e-113

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  50%
 
101  50%

Unigene MembersMember information