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Information for unigene UN42699

FASTA Sequence
Unigene ID: UN42699Length: 859 SSR 
CGATCCCTCTTCGTCTTCCTCTTCCTCTTCCTCTTCCGTTCTTCCTTAAGTACTCAATCAAAAAATTTGTAGCTTGAAGGTAGAGA
GATCAAGCGACTGAGAGAGAGAGAGAGAGAGAGAGAGTGGTGTGGAAACAAAAGCATGATCTAAGTTTTTCCTCTCAGATATTCCG
ACAACAGTATTCTCCGATCGGAGCTTTGAGACATTCCGACAGAAGCATAAAAAGATCGTTCCTTTCGTGTGTCTGTGTGTGTGAGG
GGGTTTGTCGGAAAAATGTAGCGGTACGGTCGCGCCGGTGAAGAAGAGCCGCGATCGGATCCGTCGATTGAATGGACCTCTCATGG
AGTCCAAACCAGAGTCGAACGTAACCTTCGATGTGGCGGTTAGGGTTAAGCGGCGGCGGAGCTGGAGGAGGAGGAGGAGGAGAAGC
GTACCCGGAGCGATCAAATGAGCCTGATCGTGGAGCGGCGTTTGCGGGTACGGTTCAAGATGTCGGTTTAATCACCCGCGAGATCA
TGGAGCGGTTGTTGGAGGTGTGAGAAGAGGAGTTGGAGGAGATGGAGCTTTACCGGAGAGAATGGGACAACCGGTTTGTCAGCATT
TTATGCGAACGGGAACGTGTAAGTACGGTGCTTCTTGCAAATATCATCATCCCAGACAAGGAGGAGGAGGTTCCGTTGCTCCTGTG
GCAGGGGTGTTCAAGGAGTTTGGTTTTTGATTGAACCGAGGGTGGTCGTGTACCTCTCTTTGTGGGATGATGTTGCATCAATGTTT
AAGGGTCTCATCAACTCAGGTGATAGGACACAGTCTGTCATGGTGGTCACTATATATGAATCCCAAAATATTTGGAGGTAACCTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADK63414 CCCH type zinc finger protein [Brassica rapa]3702e-033
AAF08587 hypothetical protein [Arabidopsis thaliana]3542e-031
NP_187292 zinc finger CCCH domain-containing protein 34 [Arabidopsis thaliana]3542e-031
BAF02113 hypothetical protein [Arabidopsis thaliana]3542e-031
XP_002884577 hypothetical protein ARALYDRAFT_477944 [Arabidopsis lyrata subsp. lyrata]3542e-031

Swiss-Prot top hits (Blast detail)Scoree value
Q9SQU4 Zinc finger CCCH domain-containing protein 343548e-033
Q6NPN3 Zinc finger CCCH domain-containing protein 583215e-029
Q84W91 Zinc finger CCCH domain-containing protein 322436e-020
Q5NAW2 Zinc finger CCCH domain-containing protein 62392e-019
Q5JLB5 Zinc finger CCCH domain-containing protein 122151e-016

TrEMBL top hits (Blast detail)Scoree value
B9RT23 Nucleic acid binding protein, putative2993e-025
A5B1K6 Putative uncharacterized protein2975e-025
B9N500 Predicted protein2842e-023
B9HSD6 Predicted protein2804e-023
C6T8E7 Putative uncharacterized protein (Fragment)2617e-021

Arabidopsis top hits (Blast detail)Scoree value
AT3G06410.1 nucleic acid binding / zinc ion binding3547e-034
AT5G18550.1 nucleic acid binding / zinc ion binding3215e-030
AT2G47850.1 zinc finger (CCCH-type) family protein2435e-021
AT2G47850.2 zinc finger (CCCH-type) family protein2435e-021
AT2G47850.3 zinc finger (CCCH-type) family protein2435e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
182  100%

Unigene MembersMember information