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Information for unigene UN42703

FASTA Sequence
Unigene ID: UN42703Length: 1288 SSR 
GGACTCAGTAAACTTCCCTTCTTCTCGTGAAAAATGCCAAGAGATATATCCAGAAGAATAACTAAATCCTTGCGAGAGCCGTTTCT
TTCTAAGAGAATCTTAACAATGGGGTTTTGTTTCTAAGATGCAAAAGAGCGAACTTGTTTGAAATTAGGTCCCAAGTTCCAATCTT
TTTTTTTATAAATGGTTTAATCGTGTTACCGTTGATTTTGCAGGTGTTCAAAGAATCATTTTCATGGAAGGTCTTAAACGTTTTCT
TTCGTTGTGTTCTTTGGAAAGTCTAATACTGTGTTTTTATCACAAAACGCAGAGGAAAGAGGAAACATTCATGGATGTGGAAAAAG
GAAGAAACATTTACGAGGAGATGCCTTGTTTCGATCCCAACACTCCGGCATCAGTTACGGCGGAGAGCAGCTGCTTCTCTCAAGTC
CAACCGCCGCAAATTCTTGTCGCCGGAAGCACAAGCAACAGCAACTGCAGTCTTGATGTGGAAGAGTTCCATCTCAGCCCACAAGA
CTGTCCTCAAGCCTCTCCAACACCACTTCATCAATTTCACATCAACCCTCCTACAGAACGTGAGAGAAGAGTTCACTTCAATGACC
GCTTCTCCATCCTCAAGAACCTCATTCCAAATCCCACAAAGAGTGATAGAGCTTCCATCGTTGGAGAGGCAATAGATTACATCAAA
GAGCTGTTAAGGACGATAGAGGAGTTCAAGATGCTTTTGGAGAAGAAAAAGTTGGAGGAGTTCAGGAGCATGAAGAAAGCTAAAAC
TGATGGGGAAGAAGAAGAAGAAGAAAACAATGTGAGTTACAGGCAACAGAGCCAAGTAGACCAATCTTGTTTCAACAAGAAGTCAC
TTAGATGTTCTTGGCTGAAGAGGAAATCGAAAGTCACTGAGGTTGATGTACGCATAATAGATGATGAAGTGACCATCAAGGTCGTT
CAGAAGAAGAAGATTAACTGTTTGTTGTTTACAAGTAAAGCTCTTGATCAGCTTAAGCTGGATTTTCACCATGTTGCGGGAAGACA
GATTGGTGAGCATTACAGCTTCTTGTTCAACGCTAAGATTTGTGAAGGATCTTGTGTGTATGCAAGTGGAATTGCAGACACAGTGA
TGGAGGCTGTGGAGAAGCAGTATATGGAAGCGGTTCCTACCAACGGCTACTGAAAGACAGACAGTGGTGTCTAATTGCTTTTAAAC
CCCCTAATGACTGATTAGTTATTGGACATGACTTGGGTTCACCCCCTATGGTGAACATTTATATTCACCACTTGATTTATAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180680 transcription factor bHLH10 [Arabidopsis thaliana]8491e-088
AAL55717 putative transcription factor BHLH10 [Arabidopsis thaliana]8491e-088
XP_002879313 hypothetical protein ARALYDRAFT_482049 [Arabidopsis lyrata subsp. lyrata]8373e-087
XP_002892324 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata]7092e-072
NP_172107 transcription factor bHLH89 [Arabidopsis thaliana]6967e-071

Swiss-Prot top hits (Blast detail)Scoree value
Q84TK1 Transcription factor bHLH108495e-090
Q9LND0 Transcription factor bHLH896963e-072
Q8GX46 Transcription factor bHLH914482e-043
Q9LXA9 Transcription factor bHLH611443e-008
Q9LPW3 Transcription factor SCREAM21372e-007

TrEMBL top hits (Blast detail)Scoree value
B9T7Y5 Transcription factor ICE1, putative5854e-058
B9H9L2 Predicted protein5845e-058
B9IIJ6 Predicted protein5845e-058
A5BKY1 Putative uncharacterized protein5693e-056
C0JP25 Putative basic helix-loop-helix protein BHLH144878e-047

Arabidopsis top hits (Blast detail)Scoree value
AT2G31220.1 basic helix-loop-helix (bHLH) family protein8504e-091
AT1G06170.1 basic helix-loop-helix (bHLH) family protein6963e-073
AT1G06170.2 basic helix-loop-helix (bHLH) family protein6963e-073
AT2G31210.1 basic helix-loop-helix (bHLH) family protein4491e-044
AT2G31215.1 basic helix-loop-helix (bHLH) family protein1792e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  67%
 
181  33%

Unigene MembersMember information