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Information for unigene UN42707

FASTA Sequence
Unigene ID: UN42707Length: 873 SSR 
TCAGAATTCATAATCTTAAATCCTAATCCTCTGTTCCGGAAGCTCCCTGTTCTGCTATTCTGTGTTCGTTGGATGAGGAGCAGAAG
AAAGTGAAAGTTGTAAAATATATAAAAGTTTCATGGGCAATTCATGTCGTGGTTCTTTCAAGGACAGAGTCTACGAGGGGAATAAC
ACTCGTCCCGAGGAGAATTCAAGAACCACCACCACCACCAACGTTTCCTCCGATCATTCTCCGGCCGCAGAACCACAAGACTTCTC
CAAAGAAGATTCCAAAAAGGACAATAACAACTATCCAGTTCCTGTAAAAGAACCTTTTGTACGGCGCAACATGGACAACCAAGCTC
ACTACGTTCTCGGCCACAAGACTCCCAACATCCGCGATCTATACACCTTGAGCCGCAAGTTAGGGCAAGGACAGTTCGGGACGACG
TATCTTTGCACCGAGATCGCCACAGGCGTTGACTACGCTTGCAAATCTATATCCAAGAGGAAACTCATATCCAAGGAAGATGTTGA
GGATGTTAGGAGGGAGATTCAGATAATGCACCATTTGGCGGGTCACAAGAACATTGTTACGATCAAAGGAGCTTACGAGGACCCTT
TGTACGTTCACATTGTCATGGAGGTTTGTGCTGGTGGTGAGCTGTTCGATAGGATTATCCAGAGAGGGCATTACAGCGAGAGGAAA
GCCGCTGAGTTGACCAAGATCATTGTCGGTGTTGTTGAGGCATGTCATTCTCTTGGTGTCATGCATAGAGACTTGAAGCCTGAGAA
TTTCTTGTTGGTTAATAAGGATGATGATTTCTCTCTCAAGGCCATTGATTTTGGTCTCTCTGTTTTCTTCAAACCAGGCCAAGTAT
TCAAGGATGTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884049 calcium-dependent protein kinase 6 [Arabidopsis lyrata subsp. lyrata]11525e-124
AAZ32752 putative calcium dependent kinase 6 [Brassica rapa subsp. pekinensis]11176e-120
NP_565411 Calcium-dependent protein kinase family protein [Arabidopsis thaliana]11086e-119
AAZ32753 putative calcium dependent kinase 6 [Brassica napus]10934e-117
NP_195257 calmodulin-domain protein kinase 5 [Arabidopsis thaliana]10827e-116

Swiss-Prot top hits (Blast detail)Scoree value
Q38872 Calcium-dependent protein kinase 611083e-120
Q38871 Calcium-dependent protein kinase 510823e-117
A5A7I7 Calcium-dependent protein kinase 49425e-101
A5A7I8 Calcium-dependent protein kinase 59202e-098
Q9SZM3 Calcium-dependent protein kinase 268502e-090

TrEMBL top hits (Blast detail)Scoree value
Q460M2 Putative calcium dependent kinase 6 (Fragment)11174e-120
Q460M1 Putative calcium dependent kinase 6 (Fragment)10932e-117
Q460M3 Calcium dependent kinase 5 (Fragment)10332e-110
Q8LPV8 Calmodulin-like-domain protein kinase CPK29751e-103
B0FC97 Calcium-dependent protein kinase9652e-102

Arabidopsis top hits (Blast detail)Scoree value
AT2G17290.1 CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase11083e-121
AT4G35310.1 CPK5 (calmodulin-domain protein kinase 5); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase10823e-118
AT2G38910.1 CPK20; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase7203e-076
AT5G04870.1 CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1); calmodulin-dependent protein kinase/ kinase7151e-075
AT3G10660.1 CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2); calmodulin-dependent protein kinase/ kinase/ protein serine/threonine kinase7042e-074

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  50%
 
101  50%

Unigene MembersMember information