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Information for unigene UN42708

FASTA Sequence
Unigene ID: UN42708Length: 842 SSR 
CACCATGGTCGGAATTCTCCTGGGTTTGCCTGGACAGTGGGCAGAAGATGAGCTCGAGTCTTCTGATCACTACACAACTAAAATCG
GAGGTCTTCCGGATTGGCCGCCAGTACCAGATGATGTAATGAGAGCAGAGCTACTCAATTGTACTTCATGTGGAAGTAAACTCTCT
CTCGTAGCTCAGGTTTATGCCCCAATCTCAGCTGAAAACTCGGAACGTACTCTCTATATATTCGGTTGCTTGATGATGCCTAAATG
TGGAGCTTCTGAACAAAGCTGGAGAGCTTTAAGCGTTCAGAAAGCTGTAAAGGAGAAAGAATCTATTGAAACAGAGGATCTTCCTG
TTGCTTCACCTAAGGATACACCTTCTAAACCTCATTGGCTAGACGATGGTGATGGTGATGATGATGATGATGAAGATTTTGATTTT
GAGAGTTTAGCTAAAGCCATTGCTGAAGCTGCTACTACCGTTGCATCCAACTCTAAGAAACCAAAGAGCAAACCAAGTGGTAATAC
TAGCTCATGGACTAAAGCAAAGCCTTCGCCTTTGAAATCCGAAACAAGAGATTTGGATCAGGTTAAAGCTGAGACTGGCGCGGTTC
TTCCCTGTTTCTACATCTATACAAAGGAGGAGAAAGTCTCAATAAAAGAAGATGTGGATCGTGTCTCCGTGAGTTATTCGTCTATG
TCGGTTAAGGATAAAGAAACCAGCGAGAAGAGCGACGAGAGTGAAGCTGAAGAAGCTTGGGAGGATGAGAAGTATGAATATGACAA
AGCTTTGAATGCAGATAGGACTTACCTTAAGTTCCAAAAACGATTAGATGCTAACTCTGAGCAATGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866637 hypothetical protein ARALYDRAFT_496702 [Arabidopsis lyrata subsp. lyrata]10754e-115
NP_201288 programmed cell death 2 C-terminal domain-containing protein [Arabidopsis thaliana]10281e-109
AAM61676 unknown [Arabidopsis thaliana]10163e-108
NP_001032143 programmed cell death 2 C-terminal domain-containing protein [Arabidopsis thaliana]6571e-066
XP_002529228 conserved hypothetical protein [Ricinus communis]5801e-057

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LV94 AT5g64830/MXK3_510288e-110
Q8LF04 Putative uncharacterized protein10162e-108
Q2V2V5 AT5G64830 protein6578e-067
B9STA9 Putative uncharacterized protein5807e-058
B9HG25 Predicted protein3962e-036

Arabidopsis top hits (Blast detail)Scoree value
AT5G64830.1 programmed cell death 2 C-terminal domain-containing protein10285e-112
AT5G64830.2 programmed cell death 2 C-terminal domain-containing protein6745e-071

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  50%
 
211  50%

Unigene MembersMember information