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Information for unigene UN42727

FASTA Sequence
Unigene ID: UN42727Length: 843 SSR 
CAGATTTATCCATTTTTAGTGAATAGAAAATTAATTAAATCAGAATCGGTTCTCTGGTTATGGCGTCTCTGATCTCAGATACTGAA
CCGCCTTCGCATCCACGCCCAAGTTCTACCGATCTCCTTCGAAGGAAGAAGAGACTCTCTGTTTCCTCCTCCGCATCCGTAACCAC
CGGAGACGACGGCGATAGCCACCACGCGCGATGGAAATCGGAGAAGCAGCAGCGAAACTACTCCGCGAAGCTGATCCAGGCGCTGC
AGCAGGTCCGCCTCAGCTCCTCCTCCTCCTCCGCCGCGACACCATCTCCAAAACGCGGCAAAGCCGTCCGCGAAGCCGCGGATCGC
GCACTCGCCGTCTCCGCTCGCGGGAGGACGCTCTGGAGCAGAGCGATCCTGGCGAACCGGATCAAGCTCAAATTCCGGAAACAGAA
ACGGCCGAGACCGGCGGCGGCGATCCCGGCCGTGATCACGACGACGGGAAGTATCAGCAGCAGCGGCGGCGGCGGGAGGAGATCAT
GGAAGAAACGGAGAGTGACGGTTGTGAAACTGAATAAGAAGAGTATACCGACGGTTAACCGGAAAGTACGTGTTCTCGGCCGGTTA
GTTCCGGGTTGCAGGAAAGAATCGGTACCGGTTATTCTGGAAGAAGCGACGGATTACATCCGGGCTTTGGAGATGCAAGTCAGAGC
CATGAAGTCTCTAGCCGAGCTTCTCTCCGGGTCAAACTCAGCTCCTACTAGGCCCATTTGATGAGGTTAAAATCGTCATTTCGATT
CTGCCATCTCTCTGTGTACACCAAAACACTTTCATATTAATATAATAATATATATATATATATATAAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566287 transcription factor bHLH148 [Arabidopsis thaliana]6992e-071
AAM67062 unknown [Arabidopsis thaliana]6992e-071
XP_002884594 hypothetical protein ARALYDRAFT_477966 [Arabidopsis lyrata subsp. lyrata]6793e-069
XP_002312320 predicted protein [Populus trichocarpa]5225e-051
XP_002883043 hypothetical protein ARALYDRAFT_479179 [Arabidopsis lyrata subsp. lyrata]4974e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q9C8Z9 Transcription factor bHLH1486997e-073
Q9LSN7 Transcription factor bHLH1472822e-024
O80482 Transcription factor bHLH1492095e-016
Q9M9L6 Transcription factor bHLH1501612e-010

TrEMBL top hits (Blast detail)Scoree value
C0SVA2 Putative uncharacterized protein At3g06590 (Fragment)6991e-071
B9HIM1 Predicted protein5224e-051
B9HX40 Predicted protein5091e-049
B9RZS9 Transcription factor, putative2903e-024
B9DGH0 AT3G17100 protein2823e-023

Arabidopsis top hits (Blast detail)Scoree value
AT3G06590.1 transcription factor7014e-074
AT3G06590.2 transcription factor7014e-074
AT3G17100.1 transcription factor2822e-025
AT3G17100.2 transcription factor2822e-025
AT1G09250.1 transcription factor2094e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  50%
 
181  50%

Unigene MembersMember information