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Information for unigene UN42729
| FASTA Sequence |
| Unigene ID: UN42729 | Length: 824 |
SSR | | AAGCCTGTATTCATGCATAACCCAATCAGTCCGCTCCCCACGAGGAGATTTACCAACGTGGTAAACCAGAGTCTTAATCTTTCCGA
CGACTTCACCGTTGCACAGAACGGTTCGTTCCTTCCCTGTGGTCTTCCAGAAACCAAACTCAGTTGCACGGTTAGCCCTAACACCG
GTTGCATATTTCTTTTCCCTCGGGCAGAAGAAGTGCCACTTAAGATCCCCACTCTTTATATAGGACTTATCTGGTAAGTCAGAGGG
TTCGAACTTGTAAATGTCAAGTTCAGCAATAGCATCAACGAGGAGCTTCTTCCCCAAGACTTTCCTCTTCAAGTAATATCTCACGA
GTTCAACATCAGTCGGATGAAACCGAAAACCAGGAGCCAGTTCAGTTTTCCCCATTTGGCTAATCCAAAGGGGGAAAACTTGCACT
CGGCTAAGAAACTCCTCCTCACAAGCAAGTTTGGAGTTTTGAAGCAGCGGAAGTAAAAAAAAAAAAAAAGACTATTTCTTCAAGTT
CACAGTAACAGAAGCAGCAAAAGCGAATACTTTGTACTCAAATCAAACAGAAAATTGCAGAGAAGCTAGGAAGAGAGAGAGAGAAG
AGAGAGAAAAAAGAAGGAGGTGAGAGAGAACGGTAGCTAAGTCCAGTGCCTGAACAAGATTATCTGGAAGCACCACAACCTACCCC
TGCTCATATAACCACAGTCACACCAAAGAAAAGATGGGTTCTTCTTGCAGAGATCAACAGACATCTGGTGTGGAACGTAAAGCCTG
CCGGAGAGAGAGGACTTTTCGACGGCGGAGAGGACGATCAGCGCAAGGGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873395 hypothetical protein ARALYDRAFT_487745 [Arabidopsis lyrata subsp. lyrata] | 663 | 2e-067 |
| NP_196495 NAC domain containing protein 82 [Arabidopsis thaliana] | 662 | 3e-067 |
| NP_201211 NAC domain containing protein 103 [Arabidopsis thaliana] | 570 | 1e-056 |
| XP_002866590 ANAC103 [Arabidopsis lyrata subsp. lyrata] | 567 | 3e-056 |
| ADZ55681 NAC transcription factor [Setaria italica] | 524 | 3e-051 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84K00 NAC domain-containing protein 78 | 464 | 1e-045 |
| Q7GCL7 NAC domain-containing protein 74 | 384 | 2e-036 |
| Q9M274 NAC domain-containing protein 66 | 371 | 8e-035 |
| Q9FWX2 NAC domain-containing protein 7 | 367 | 2e-034 |
| Q5Z6B6 NAC domain-containing protein 76 | 363 | 6e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FY82 AT5G09330 protein | 662 | 2e-067 |
| Q9FMJ1 Similarity to NAM | 570 | 1e-056 |
| B9RU40 Transcription factor, putative | 517 | 1e-050 |
| B9MZ91 NAC domain protein, IPR003441 | 511 | 7e-050 |
| Q9M4U3 NAC1 | 510 | 9e-050 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G09330.1 anac082 (Arabidopsis NAC domain containing protein 82); transcription factor | 662 | 1e-069 |
| AT5G09330.2 anac082 (Arabidopsis NAC domain containing protein 82); transcription factor | 662 | 1e-069 |
| AT5G09330.3 anac082 (Arabidopsis NAC domain containing protein 82); transcription factor | 662 | 1e-069 |
| AT5G09330.4 anac082 (Arabidopsis NAC domain containing protein 82); transcription factor | 662 | 1e-069 |
| AT5G64060.1 anac103 (Arabidopsis NAC domain containing protein 103); transcription factor | 570 | 6e-059 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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