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Information for unigene UN42747

FASTA Sequence
Unigene ID: UN42747Length: 733 SSR 
GGGGTGAAAAAAAAAAAGAGAGAGAGAGGTAAATCTCCGACGATGAGCGAAACGGAAGCAACCGATGAATTTGCTCCAGAGAATGC
AACTGCTGCTGATGCGACGGAGCATACATCGATCGGGGTGGTTGATTCGGTGGAGGAAGCCATAGGAGGAGGAGGAGCAGAGAAAT
GGGTGGATGGTTTCCAGCGTACGGTGAAGGAATCGACTGACTCCGCCATTCGCTCCGCTCGTTCTCTCCGTGAAAACTCCACCTCT
CAGTTCCGCTCTATACAGGATTTTGTTCCACATGCTTTGACTCAGTATAAGACCTATGAGAATGCTTTCTTCAGCAAAGTAACTGA
AGAATTGATAAACGCAAAGGAGCATCCGGCTGCTGCTGCTGGGATTGGTCTAGCTGCTGGTCTTGTTCTTATGCGAGGCCCTAGAA
GATTCTTGTTTCGTCGTACACTCGGCCGGTTTCAGAGCGAAGAGGCACAGTTCTTGAGAGCTGAGAAGCATGTCCAGGAGCTGAAC
ATGTCTGTAGACTTGATGAAAAAGGAGAGCAGTAAATTACTAGAGAGGTCGGCTTTAGCAGAGAAGGATATGAAGCGCGGTCTTTC
TGAACTCATGGACTCTGGAAACAATATACATCGTCTTGCTAAGTCCGTTCACAATTGTGAATGCCAAGCTGCAGATTTAATGGATG
GACTGCGGCAAATTCCTGGGAGGGAAGCTATCAAGCTTAGAGCCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869612 hypothetical protein ARALYDRAFT_913923 [Arabidopsis lyrata subsp. lyrata]9642e-102
NP_194371 uncharacterized protein [Arabidopsis thaliana]9392e-099
CAA18229 putative protein [Arabidopsis thaliana]8308e-087
XP_002523392 conserved hypothetical protein [Ricinus communis]6712e-068
XP_002299091 predicted protein [Populus trichocarpa]6409e-065

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q84K90 Putative uncharacterized protein At4g264109391e-099
O65593 Putative uncharacterized protein AT4g264108306e-087
B9SBM3 Putative uncharacterized protein6712e-068
B9GLB3 Predicted protein6406e-065
C6TCA2 Putative uncharacterized protein5099e-050

Arabidopsis top hits (Blast detail)Scoree value
AT4G26410.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45060.1); Has 47 Blast hits to 47 proteins in 12 species: Archae - 3; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 40; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink).9398e-102
AT2G45060.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26410.1); Has 50 Blast hits to 50 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).2651e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information