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Information for unigene UN42753

FASTA Sequence
Unigene ID: UN42753Length: 1131 SSR 
GGAGAAACAATCTTTCGTTGAAAAAATTATCTGAGAGAGAGAGAGAGAGAGATAATGGCGGAGATCAATGGTCGGAGGATCGGAGT
AGCAGTGGATTTCTCGGAGTGCAGCAAGAAGGCTCTGAACTGGGCGATCGACAACGTGGTTCGCGATGGCGATTATCTAATACTCA
TCACCGTAGCTCACGATATGCATTACGAGGACGGCGAGATGCAATTATGGGAGACCGTTGGTTCTCCTCTGATTCCGCTGAGTGAA
TTCTCGGAAGCGGCTGTGATGAGGAAGTATGGAGTGAAGCCAGATGCTGAAACCCTTGACATTGCCAACACTGCCTCTAGGCAGAA
ATCGATAACAGTAGTGATGAAGATATATTGGGGAGATCCTCGTGAGAAGATTTGTGAAGCTGTTGAACATATTCCTCTCTCTAGCC
TTGTCATCGGTAACCGTGGCCTTGGCGGCCAGTGCTCCTAAGATCATAGAAGCAATGCTGCAGAAAAAGAAGATTTGTTGCAATGT
AGCTCCATAGGAACCATAAATAAAAACACGTAAAATATTAGCAAAAATAGAGATTTTAGGCGCAATAGAAAGGAATGCTGTAACCG
GGGTGGGTGAACCCTCATAGATATCTGGTGCCCACATATATAGAGTCAAAAGGAATATGGAGTCCGAGGGGGAGGGGATTTTTTTC
GGGGCTCGAAAGATTGAATAGACCCACAAGTTTGAAATTCGCCACTGGGGAATTCACACGAAAGGGAACGAGGAATTCTCAACGAA
AAAAGTGCTTTTTGAACCGAACGTGAAAGTTTTTTTCCATCAGACGGCTGTTCCTGTAACTCCACTCTCGACTTGGATTATATATC
CAAAAAGGTCCGCTTTCGGCCATTCCACACGCTGCCTAGCCGCCCCGGCCGTAAGCAGTGGTATCAACGCAGAGTGGAAACCAAAC
CACAGAACTAGAGGAGCTCTTCATGGACACGTATAGGTAATATATAATGACACTCACAAATGCAAAGCAAATTTGTTTGCCTGTAC
TTTGCTACTTCATTGCTTCTTCTGCTCTTTTTATTTTTGTTTTGTTTTTGTTTGTTGTTGTTTGCAAGAATATTTTAGTTGCAAAA
TTCATTTTTTCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABL97971 unknown [Brassica rapa]6779e-069
NP_566564 universal stress protein (USP) family protein [Arabidopsis thaliana]6089e-061
XP_002885183 universal stress protein family protein [Arabidopsis lyrata subsp. lyrata]6089e-061
XP_002277653 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]5301e-051
XP_002519217 conserved hypothetical protein [Ricinus communis]5301e-051

Swiss-Prot top hits (Blast detail)Scoree value
P15688 NADH-ubiquinone oxidoreductase chain 23414e-031
O05000 NADH-ubiquinone oxidoreductase chain 23218e-029
P93401 NADH-ubiquinone oxidoreductase chain 23218e-029
P26846 NADH-ubiquinone oxidoreductase chain 22652e-022
B8IUV9 NADH-quinone oxidoreductase subunit N1684e-011

TrEMBL top hits (Blast detail)Scoree value
A1YMW5 Putative uncharacterized protein6776e-069
Q9LSP5 AT3g17020/K14A17_146086e-061
B9RZP8 Putative uncharacterized protein5307e-052
A9PIB2 Predicted protein5002e-048
D6BRD7 Universal stress protein4958e-048

Arabidopsis top hits (Blast detail)Scoree value
AT3G17020.1 universal stress protein (USP) family protein6084e-063
AT3G03270.1 universal stress protein (USP) family protein / early nodulin ENOD18 family protein3324e-031
AT3G03270.2 universal stress protein (USP) family protein / early nodulin ENOD18 family protein3324e-031
AT3G53990.1 universal stress protein (USP) family protein3252e-030
ATMG00285.1 encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from two precursors, NAD2A and NAD2B.3055e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information