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Information for unigene UN42764
| FASTA Sequence |
| Unigene ID: UN42764 | Length: 707 |
SSR | | AAAAGAAAAAAGAAAGAACTCTCCGAAAGAAGAAGAAGAAGAAGAAAACATGGCGACAAGCGCATCTGCTATGCTCACACCCACAA
CAACCTTCTCCACTACAATCTCCCAGAAAAACCCCAACTCCATCTCATTCCACGGCCTCCGTTCTCTCCGCCTCGGTGGCTCCTCC
TCCTCCTCCTCCGCCTTACCCAAGCTATCCACCACCACCTCCGGGAGAAGATCTTCCTCCGCCGTCGTGAGAGCCGAGCTCAGCCC
ATCCGTCGTTATAAGCCTCAGCACTGGTCTATCCCTCTTCCTTGGCCGGTTCGTCTTCTTCAACTTCCAGAGAGAGAATGTGGCGA
AACAGGTGCCGGAGCAGAACGGAAAAACCCACTTCGAAGCCGGAGACGATCGTGCCAAGGAGTACGTAAGCCTCTTGAAATCGAAC
GACCCTGTTGGATTCAACATCGTTGATGTTCTTGCTTGGGGTTCTATTGGCCACATCGTTGCTTACTATGTCTTGGCCACTTCTAG
CAATGGCTACGATCCTAGCTTCTTTGGCTGATTCTTTCTGTCTCTCTGTTCCTTGTTCATGTATATGTTTGACTTGTATCTCAAGC
TGCCAAATGTGTCCTCTTATCTATGTTTCTCCCACCTCTATTATTATTGTCTAGGGTATAAATCTCTCTTTCGTTTGCAAGACTTA
AATATATTTCATGATCAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_175963 photosystem I reaction center subunit V [Arabidopsis thaliana] | 694 | 4e-071 |
| XP_002894517 hypothetical protein ARALYDRAFT_474626 [Arabidopsis lyrata subsp. lyrata] | 691 | 1e-070 |
| CBI39855 unnamed protein product [Vitis vinifera] | 541 | 2e-053 |
| XP_002264233 PREDICTED: hypothetical protein [Vitis vinifera] | 536 | 9e-053 |
| XP_002531767 Photosystem I reaction center subunit V, chloroplast precursor, putative [Ricinus communis] | 534 | 2e-052 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S7N7 Photosystem I reaction center subunit V, chloroplastic | 711 | 2e-074 |
| P12357 Photosystem I reaction center subunit V, chloroplastic | 530 | 2e-053 |
| Q00327 Photosystem I reaction center subunit V, chloroplastic | 479 | 2e-047 |
| Q9SPM4 Photosystem I reaction center subunit V, chloroplastic | 228 | 2e-018 |
| P20120 Photosystem I reaction center subunit V (Fragment) | 165 | 5e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T0J8 Photosystem I reaction center subunit V, chloroplast, putative | 534 | 1e-052 |
| A5BMA7 Putative uncharacterized protein | 530 | 3e-052 |
| C6SWM2 Putative uncharacterized protein | 519 | 6e-051 |
| A9PEV3 Putative uncharacterized protein | 516 | 1e-050 |
| A9PFU1 Putative uncharacterized protein | 516 | 1e-050 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G55670.1 PSAG (PHOTOSYSTEM I SUBUNIT G) | 712 | 2e-075 |
| AT4G13340.1 leucine-rich repeat family protein / extensin family protein | 124 | 2e-007 |
| AT2G25050.1 formin homology 2 domain-containing protein / FH2 domain-containing protein | 121 | 5e-007 |
| AT3G22800.1 leucine-rich repeat family protein / extensin family protein | 115 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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