 |
Information for unigene UN42803
| FASTA Sequence |
| Unigene ID: UN42803 | Length: 556 |
SSR | | GAGACTACGTCAGGATCTCCTCCGAATGCAAGCATCTCTTATCTCGTATCTTCGTTGCTGACCCTGATAAGAGAATAACTGTGCCG
GAAATCGAAGAACACTCCTGGTTCTTGAAGAATCCAGAGCCGGTTATTTCAGAAAAGAAAATAGTGGAAGAGGAAGAGGAAGAAGA
AGAAGAAGAAGAAGAAGAAGAAGAGAAGAGTAGACAGAGTGTTGAAGAAATAGTGAAGATAATAGAAGAGGCGAGAAAGGATGTGA
ATGGTAAGAATGATAGTAATGGTGGATTAGGCTTAATAGAGGAAGCATGATTGATCTTGATGATATTGATGATGAGGTGGATGATG
ATGATGAAGATGAGAAAAATGGTGATTTTGTATGTGCTCTATGAGTTTCATATACATACTGCATTTGGTGCGTATGTTCATGCATG
TATTTTTTTTTAATCTGTGTGTAGCTTGAGAATATCCTATGATTTCGTGTTGCATAAAGTATGGTCTGTATAATTAATAATAAGTG
GAAAATAATTAACCAATAATTAAGTCAAATAAAGTTGTCT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_195711 serine/threonine-protein kinase SRK2F [Arabidopsis thaliana] | 352 | 1e-031 |
| XP_002868939 hypothetical protein ARALYDRAFT_353011 [Arabidopsis lyrata subsp. lyrata] | 320 | 5e-028 |
| XP_002309964 predicted protein [Populus trichocarpa] | 233 | 7e-018 |
| XP_002531668 Serine/threonine-protein kinase SAPK1, putative [Ricinus communis] | 222 | 1e-016 |
| XP_002517501 Serine/threonine-protein kinase SAPK3, putative [Ricinus communis] | 222 | 1e-016 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SMQ4 Serine/threonine-protein kinase SRK2F | 352 | 6e-033 |
| A2ZAB5 Serine/threonine-protein kinase SAPK3 | 213 | 8e-017 |
| P0C5D6 Serine/threonine-protein kinase SAPK3 | 213 | 8e-017 |
| A2YNT8 Serine/threonine-protein kinase SAPK2 | 206 | 5e-016 |
| Q0D4J7 Serine/threonine-protein kinase SAPK2 | 206 | 5e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HFD8 Predicted protein | 233 | 5e-018 |
| B9RUQ6 Serine/threonine-protein kinase SAPK3, putative | 222 | 9e-017 |
| B9T099 Serine/threonine-protein kinase SAPK1, putative | 222 | 9e-017 |
| C6TDG2 Putative uncharacterized protein | 220 | 2e-016 |
| B9N2V2 Predicted protein | 216 | 5e-016 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G40010.1 SNRK2.7 (SNF1-RELATED PROTEIN KINASE 2.7); kinase | 352 | 6e-034 |
| AT4G33950.1 OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase | 197 | 5e-016 |
| AT4G33950.2 OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase | 197 | 5e-016 |
| AT1G60940.1 SNRK2.10 (SNF1-RELATED PROTEIN KINASE 2.10); kinase | 181 | 4e-014 |
| AT1G60940.2 SNRK2.10 (SNF1-RELATED PROTEIN KINASE 2.10); kinase | 181 | 4e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
