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Information for unigene UN42809
| FASTA Sequence |
| Unigene ID: UN42809 | Length: 673 |
SSR | | GAATGAAAACCTTACAACTTTTCAACACACCAAATCTTTTTTTGTTACATATTTGCTCACCAAAACTTGTCTACTTAACAAGCCTC
CCAAATCTCAACAATTTCATTCACAAATCGATCTGTAATATCGAGAGATCATCGTAGAAAAACCATAAAGTCACTTATTTAAAAGA
AAGAAAAAAGAAGATGGATAATAACAATAACCAGCAAACGTTTTGGTAGTTCAGCGATCAATTGAGAGTCCTCCAGACGCCGCACA
ATCTTTCCTTAAACGACTCCATCTTGAGCACCACCAACAAACGCACCGACGACCGCAGAAACTTCGACATCGCAGCTGCCTCCACC
AACAAAAACCCTATCGAATATCACAACAGCAACAAGGCTTCTTCCGACAACAACAACAACAACAACACTGCGAGCTGGAACACCTG
GAAGTCTAGCTCCAACGGTTTCGGACCCATCGGCTCAAAATCAACAACATCCACAAACGTCAATTTCAACCGCACCGACGACAACC
CCTGGAAATTCAACAACTCGGACGTCAACAACGGGGATTTCAACAAGGGCGTCTACTCCTCGCAGCCCAAGAGCTATGGCTTCAAT
TTCAAGAACAACAAGGGGATGCTCATCGATCAAGATCATCATCAGATCTCCCAGAAAGGAGTAGGGAAAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| EGR50668 N-terminal WSC domain-containing protein [Trichoderma reesei QM6a] | 165 | 9e-010 |
| Q02817 RecName: Full=Mucin-2; Short=MUC-2; AltName: Full=Intestinal mucin-2; Flags: Precursor | 164 | 1e-009 |
| AAA59163 mucin [Homo sapiens] | 164 | 1e-009 |
| CBJ25057 C. elegans protein C30H6.1c, partially confirmed by transcript evidence [Caenorhabditis elegans] | 163 | 1e-009 |
| CBJ25058 C. elegans protein C30H6.1d, partially confirmed by transcript evidence [Caenorhabditis elegans] | 163 | 1e-009 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q02817 Mucin-2 | 164 | 5e-011 |
| P98088 Mucin-5AC (Fragments) | 153 | 1e-009 |
| Q05049 Integumentary mucin C.1 (Fragment) | 149 | 3e-009 |
| P47179 Cell wall protein DAN4 | 145 | 9e-009 |
| P13728 Salivary glue protein Sgs-3 | 142 | 2e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D3KFV8 Protein C30H6.1c, partially confirmed by transcript evidence | 163 | 1e-009 |
| D3KFV9 Protein C30H6.1d, partially confirmed by transcript evidence | 163 | 1e-009 |
| A8X764 Putative uncharacterized protein | 154 | 1e-008 |
| O96503 GP900 | 154 | 1e-008 |
| C6KRM5 Protein C30H6.1a, partially confirmed by transcript evidence | 153 | 1e-008 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G42050.1 FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27090.1); Has 5084 Blast hits to 2870 proteins in 85 species: Archae - 0; Bacteria - 24; Metazoa - 270; Fungi - 58; Plants - 157; Viruses - 8; Other Eukaryotes - 4567 (source: NCBI BLink). | 322 | 2e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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