Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN42836

FASTA Sequence
Unigene ID: UN42836Length: 768 SSR 
GGAACGTTTGATAGTGTAAGAGAAAGAGAAAAAAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAAGGTGATGATGAAGCTATGGAA
ACGAGCTTCCGGTGCTCTCAAAGACCGGAAAAGCTTGTTCTCCGTCAGCTTCTCCCGGACAACCTCCTTCCGCAACCCTGACCTTG
ACTCCGCCATCATCCACGCAACCTCTCACGACGACTCCTCTGTCGATTACCACAATGCTCACCGCGTCTACAAATGGATCCGCTCC
TCTCCAGCAAACCTCAAGCCTCTTGTCCACTCGCTTTCCTCACGTGTTAACCGGACAAGAAGCTGGATAGTTGCCTTGAAAGCCCT
AATGCTCGTCCACGGTGTCCTTTGCTGCAAAGTCCCCTCCCTTCACGAGATTCGTCGTCTCTCTTTCGACCTCTCGGACTTCTCCG
ACGGCCATTCACGTCCCAGCAAGACTTGGGGCTTCAACGCTTTGATACGAGCTTACTTCTCGTTTCTTGACCAGTACTCTTTCTTT
TTATCCGACCAAATCTGTTCTCGGAATAGAAAACCTCAGGTAGATTCTGTTAACCAAGAGCTCGAAAGCATCGAGAAGCTACAGTC
TCTTCTCCATACGCTTCTACAGATACGTCCAATGGCTGACAACATGAAGAAGACGCTTATCCTTGAAGCCATGGACTGTGTAGTGA
TTGAGATCTTCGACATTTATGGTAGATCTGCAGCGGTATAGCGAAGCTTCTCATTAAATAAGTCCAGCTGCTGGAAAGCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173895 putative clathrin assembly protein [Arabidopsis thaliana]10243e-109
XP_002893431 hypothetical protein ARALYDRAFT_890187 [Arabidopsis lyrata subsp. lyrata]10243e-109
XP_002888638 hypothetical protein ARALYDRAFT_894560 [Arabidopsis lyrata subsp. lyrata]7789e-081
NP_564922 putative clathrin assembly protein [Arabidopsis thaliana]7762e-080
XP_002521908 clathrin assembly protein, putative [Ricinus communis]6873e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q9FRH3 Putative clathrin assembly protein At1g2524010241e-110
Q9C9X5 Putative clathrin assembly protein At1g681107767e-082
Q9LQW4 Putative clathrin assembly protein At1g146864066e-039
Q9SHV5 Putative clathrin assembly protein At2g019203223e-029
Q8LF20 Putative clathrin assembly protein At2g254301952e-014

TrEMBL top hits (Blast detail)Scoree value
B9S7D9 Clathrin assembly protein, putative6872e-070
B9HJL1 Predicted protein6773e-069
A5AP60 Putative uncharacterized protein6488e-066
A2YW21 Putative uncharacterized protein4507e-043
Q6YS99 Os08g0467300 protein4507e-043

Arabidopsis top hits (Blast detail)Scoree value
AT1G25240.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related10241e-111
AT1G68110.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related7767e-083
AT1G14686.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related4066e-040
AT2G01920.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related3223e-030
AT2G25430.1 epsin N-terminal homology (ENTH) domain-containing protein1952e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information