 |
Information for unigene UN42843
| FASTA Sequence |
| Unigene ID: UN42843 | Length: 816 |
SSR | | GGATGTTCTTGATCAGCAGCATCTCATGCGTGTTTCCTCTGCTTCTTTGTGTTTGACTACTCTGAGATCTAAGTTTGAAAAATAAT
GGGCGAGGATCAGCGTGACAAAGGACTCTTCCACCACTTAGCAGGTGGACACTACCGACCTTACGGTCATCATGGTTATAGTAATC
ACGGTCATCATGGTTATGGAATTCCTTATGCATACCCTGCTCCTCCTCCTCCGTATGGTTATCCACCAGTTGCTTATCCTCCACAC
GGTGGTTACCATCCAACCGGTTATCCTCCTACCGGTTATCCACCTCACGGTTATCCATCTCACGGTAATTATCCCGGTCAGTCTCA
CGGACACCACCACCACGGAGGTATAGGAGCGATGATCGCGGGTGGAGCGGCTATGGCAGCTGCAGCAGTTGGTTCTCACCACCACG
GACACTATGGTCACCATCACGGTCACGGCTATGGGTACGGGTATCACAAACACGGTAAGTTCAAGCATGGGAAGTTCGGGAAACGC
TGGAAACATGGCATATTTGGGAAGCACAAGGGAAAATTCTTCAAGAAATGGAAGTGATTTGTTTCCTGAAAAAGATTGATCCAATC
CAGAGACTATACATTATATATATATATCACTATGTAACAACAATAAATGTTCAAGTCTCTGAAAATATTACATAGTTATTGTGAGC
CTTAAGAGGCTAGAATGTCATAATTTTTCTTTCTCGGTTTGGTATTATCAAGCTTTTCTTTTGTTTTATATTCTCATGTATAAAGT
TTGCTTCATGATCCACTTGTTTGAAAACGATCTTTAATACGG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197267 glycine/proline-rich protein [Arabidopsis thaliana] | 683 | 1e-069 |
| BAE98420 glycine/proline-rich protein [Arabidopsis thaliana] | 683 | 1e-069 |
| XP_002873841 expressed protein [Arabidopsis lyrata subsp. lyrata] | 673 | 2e-068 |
| ACU13708 unknown [Glycine max] | 414 | 2e-038 |
| XP_002268577 PREDICTED: hypothetical protein [Vitis vinifera] | 413 | 2e-038 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P37705 Glycine-rich protein A3 | 286 | 5e-025 |
| Q28640 Histidine-rich glycoprotein (Fragment) | 195 | 2e-014 |
| P09241 Rhodopsin | 170 | 2e-011 |
| P04929 Histidine-rich glycoprotein | 154 | 1e-009 |
| Q8LCL8 UPF0467 protein B | 149 | 4e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WWS8 Glycine/proline-rich protein | 683 | 8e-070 |
| Q9LF59 At5g17650 | 683 | 8e-070 |
| C6SWT5 Putative uncharacterized protein | 414 | 1e-038 |
| C0IN06 Proline-rich family protein | 364 | 7e-033 |
| B9SDA8 Glycine-rich protein A3, putative | 358 | 4e-032 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
