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Information for unigene UN42879
| FASTA Sequence |
| Unigene ID: UN42879 | Length: 753 |
SSR | | GGGACCGTATTTGGGGACACGTGTAGACAAAAGAGAGGAGAAGGAAGCTGAAGAACACGTTGTCGATTTACCCTTCGCCGTCGGTA
CGGATTCGAGCGGTGAGCTGTTTAACGAAGCGAACTGGGCTTCAGATGTGAGTTAGGCGCGGAGATCGCGGCAAGTGCGGCGGGAT
TCCGGCAGAGAGAAGGAGGTAATGTTGAGTTTGATTATGGTGACTCTGGGTACGAGATTCTCGGTTGGATCAATGACCGTCTTCAT
CTCAATCCCTCTCGCATCGAAGAGAGGGACTCTTCATTCAGTTGATCAGTACCTCAATATCAAGCTCGAGAACACTCGTGTTATTG
ATCAGAACAAGTTCCCTCACACGAGAGCAGAGCACCTGAGATATGTGGCTTCATCACTGTGCTGACCTAACAATTATACTGCATGG
GACGAGGGAAGAGGAACAAGCTTTGTCTGGAACGTTGAGATGGCATAAATCAGGGAAGAGCTTTAACCAAGAACATCTAGTAAACT
TGTACAGTCCTGAGTATTAGCAAGCAAAGGTAAAACAGATAACTTAATCCATCATCATCATCATCATCTTTATCTATCTCTAGTGG
GGGAACAATCTAGTTGGTGTTGTGATTGATTGCTTTTGTTGCCAAGGCCAAGCCCTTAATCAAACTACTCGACTTGTAAAGATTTG
TCACTGACTTTAAGAATCAAACTGCTTGTGTCTATATAAAGTTGTATGTATCAATTTTTTATTCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_849288 uncharacterized protein [Arabidopsis thaliana] | 165 | 1e-009 |
| XP_002868858 hypothetical protein ARALYDRAFT_490637 [Arabidopsis lyrata subsp. lyrata] | 157 | 9e-009 |
| XP_002872837 hypothetical protein ARALYDRAFT_490324 [Arabidopsis lyrata subsp. lyrata] | 155 | 2e-008 |
| NP_195584 uncharacterized protein [Arabidopsis thaliana] | 149 | 8e-008 |
| CAB37528 hypothetical protein [Arabidopsis thaliana] | 149 | 8e-008 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GYI5 Putative uncharacterized protein | 165 | 7e-010 |
| Q8GYS1 Putative uncharacterized protein At4g38730 | 149 | 5e-008 |
| Q9SZP9 Putative uncharacterized protein F20M13.280 | 149 | 5e-008 |
| Q9T0I2 Putative uncharacterized protein AT4g38730 | 149 | 5e-008 |
| A9PD52 Predicted protein | 140 | 6e-007 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G02425.1 unknown protein | 165 | 5e-012 |
| AT4G38730.1 unknown protein | 150 | 3e-010 |
| AT2G21120.1 unknown protein | 141 | 3e-009 |
| AT1G03330.1 small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative | 140 | 4e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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