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Information for unigene UN42881
| FASTA Sequence |
| Unigene ID: UN42881 | Length: 799 |
SSR | | GGAGGTTCCTTCTTCTTCTTCTTCTTCTCACCTTCTGATATTTGTTTCTTTAGAATCTTTTTCTCTTTTCTCACAAAAATAAAATC
AAAAGTACTATAATTATTATTTTCCCATTTTCAATTACACCACTTTGCGCCGCTGAGCAATCAATAAGGAAAGAGAAAGAGAGAGA
AGAAGAAGCTCGTTGGATTCCATTTTCAGATATTTTCTTGAATCTGTTGGTTGTCTCTTACCTTTATAAAATGGGTAATTGTTTGG
ATTCATCGGCTAAAGTGGACAGTAGCAGCCGCCACAGTCCTCATGCTAATTCTGGTTCATCGGGTTCAAGAGTTTCTAGCAAGACG
AGCCGCCGCTCCACAGCTCCCTCAAGCAGCTTAAGCATCAATTCCGACACTAGCGTAGAGTCTTTAGCTACTACACCAAGAACCGA
AGGAGAGATACTGTCATCACCCAATCTCAAAGCTTTCACCTTTCACGACCTCAAGAGCGCTACTAGGAACTTCCGACCTGATAGTC
TCCTTGGCGAAGGAGGCTTTGGTTATGTCTTTAAAGGCTGGCTTGATCGCACAACGCTTACCGCTTCAAAACCTGGTTCTGGTATC
GTTGTCGCTGTTAAGAAGCTTAAAACCGAAGGTTTTCAAGTCATAAGGAGTGGCTGACAGAAGTGAACTATCTAGTCAGCTTAGTC
ATCCAAATCTGGTCAAACTAGTTGGGTATTGTGTAGAAGTGAGACGGGTGTTGGTATATGAGTCATGCCTAAAGAGCTTGAGATCA
TCTTTTAGACGTGGTGCGCAGCCAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876829 hypothetical protein ARALYDRAFT_484186 [Arabidopsis lyrata subsp. lyrata] | 515 | 3e-050 |
| BAC42058 putative protein kinase [Arabidopsis thaliana] | 512 | 7e-050 |
| NP_178383 protein kinase 2B [Arabidopsis thaliana] | 512 | 7e-050 |
| NP_172889 protein kinase 2A [Arabidopsis thaliana] | 468 | 9e-045 |
| XP_002890052 hypothetical protein ARALYDRAFT_471608 [Arabidopsis lyrata subsp. lyrata] | 464 | 3e-044 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O49840 Protein kinase 2B, chloroplastic | 533 | 1e-053 |
| O49839 Protein kinase 2A, chloroplastic | 468 | 4e-046 |
| P46573 Protein kinase APK1B, chloroplastic | 336 | 8e-031 |
| Q06548 Protein kinase APK1A, chloroplastic | 316 | 2e-028 |
| O48814 Serine/threonine-protein kinase BIK1 | 307 | 2e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S298 Protein kinase APK1A, chloroplast, putative | 405 | 1e-037 |
| B9HJT3 Predicted protein | 397 | 1e-036 |
| B9HVA3 Predicted protein | 397 | 1e-036 |
| B8APB2 Putative uncharacterized protein | 387 | 2e-035 |
| Q8S7W7 Putative uncharacterized protein | 384 | 3e-035 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G02800.1 APK2B (PROTEIN KINASE 2B); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 512 | 3e-052 |
| AT2G02800.2 APK2B (PROTEIN KINASE 2B); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 512 | 3e-052 |
| AT1G14370.1 APK2A (PROTEIN KINASE 2A); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 468 | 4e-047 |
| AT1G26970.1 protein kinase, putative | 374 | 3e-036 |
| AT1G69790.1 protein kinase, putative | 341 | 2e-032 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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