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Information for unigene UN42894

FASTA Sequence
Unigene ID: UN42894Length: 689 SSR 
AAAAAAAAACAGAAGCCTAATAATTAACTTTACTGCATTATGCACAATTCGTTACAAAACACCATCCACAACAAATACAATTCTTT
GTTACCATAACAACACGGAAACACACACACACACGCACGCACGCACCCACGACAATGAAGTTTATTATCAGCAGGACTTTCCTGGT
CTGCAATCAAGCGTACCAGCATCTTTTGTGAGGCTTCTTACCTTTGTTCCTGGCTGAGGACGGATCGTGAACTCTTTAGGGATTGG
ATTTTTCGGTGTAGAGCTCCATGCATTTGACTTTCCTGATTGCACAAAGTAAGCTCCATTCAAAAAGTAATCTCTCTCTGATTGCC
AGTTCCATGACTTCCACTCTGGATACGGTGTGTACTCTCTCTTTGTAACCTGCTTGCAATCTTCTTTTGGAGGAGCAATGAAACGA
TTGCCTTGACTTATAATGGTAGGGTTCATGTTTCCACCAATTGCATACATCTCCCAGTGAGTGTAGTCATTGTTCACTACATGGAC
CATACCGTATCTCACCCTTGGCATCCTTTGGTCCAATCTCTTACCAAAATGGTTAAACGCAACCGTGATCTGCATTTTCTTGTCGA
AATCGTCACCGTTTTTAGCCCCAAACAGCATCACCTCCTCATGGTCGGTGAAATGGGAATTGGAGATAGTAATGGCGGTTGATCCC
A

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875142 pectate lyase family protein [Arabidopsis lyrata subsp. lyrata]8818e-093
NP_178375 putative pectate lyase 6 [Arabidopsis thaliana]8772e-092
XP_002892805 hypothetical protein ARALYDRAFT_471616 [Arabidopsis lyrata subsp. lyrata]8163e-085
NP_172894 putative pectate lyase 3 [Arabidopsis thaliana]8101e-084
AAB69759 putative pectate lyase [Arabidopsis thaliana]8101e-084

Swiss-Prot top hits (Blast detail)Scoree value
O64510 Probable pectate lyase 68771e-093
Q9M9S2 Probable pectate lyase 38107e-086
Q9SRH4 Probable pectate lyase 75642e-057
Q9LFP5 Putative pectate lyase 195526e-056
P15722 Probable pectate lyase P595445e-055

TrEMBL top hits (Blast detail)Scoree value
Q5U1E6 At2g027208772e-092
Q680M0 Putative uncharacterized protein At1g144208101e-084
A5ACS2 Putative uncharacterized protein5536e-055
A2Y966 Putative uncharacterized protein5402e-053
B9N4A0 Predicted protein5375e-053

Arabidopsis top hits (Blast detail)Scoree value
AT2G02720.1 pectate lyase family protein8789e-095
AT1G14420.1 AT59; lyase/ pectate lyase8115e-087
AT3G01270.1 pectate lyase family protein5688e-059
AT5G15110.1 lyase/ pectate lyase5562e-057
AT5G63180.1 pectate lyase family protein4943e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
101  50%

Unigene MembersMember information