RadishBase

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Information for unigene UN42895

FASTA Sequence

Unigene ID: UN42895	Length: 936	SSR
CCCCATTTTAAACCTAGAAAGAAAAAAATTACACTTTTTGTACAATTGGTGCTTCTCCTATTTTCCCATTTTTGAGATTTTTTGCC TACCAAAATCTTGATTTTTTTCTTTCCATTTCTCCTGATTTTTCTTTAGCATGAAAAATTAGTTATTGTTTTTCTTCTTTGGTCCC CTCTAAAGAATGCTAAGGGGCAATCAAAAGTAACTCTACATATTGATCTCCGACTTCCGGACCAGCATAATGGGCAGTCCGTTTTG GGGAAGGGCAAAGGGTCCATAATGAATCTCGTCACTAGCTCCAGCTATCGACCATCTGTACTTGGTGGTTAGATGATGTATCATGA TAGACATCTCAAGCTTGGCTAGTTCATTTCCAGGACACGAGTGGGTTCCATTGCCAAATGGCATGAAAGTATTGGGTTTTGGAGCC ACCTCAAATCTTGATGGATCAAACTTCCCAGGATTTGAAAAGATATCAGCACTATGATGAATGTTTCTGAAAAGCGGCAAAACTTT CCATCCTTTAGGTATTAAATATCCTTCGTACTCCACGTCTTCTACAGCTTCTCTGAATGTGAAAGATAATATTGAAGCAACTCTCA ATGTTTCTTGAATGACTCTTGAAGTTATTGGCATCTTCTTTGTATCACTCCAAGTTAGAGACTCTCCTTCTCCTTTGTCTTTCCTT ATTGCCATCTGCTCTTCAGTAACGGCTTCTAGAACGTTGGGATTCTCAGCTAAGTACTTGAGGATCCACGTCATCACACTCGCCGT CGTGTCTCTAGCCGCGAAGATGACTCCGATGATGTTATCGGCGATCTGTTCGTCGCTCAGCTCTTCTTTGTCTCCCATGAATGAAC CGAGAAGATCGTTGTGCGAGGATCTGTTCTCTCTCTCTCCGATAGATCCTAGCGAGGATCTGCGAGAGCTCCTTGC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
BAJ34082 unnamed protein product [Thellungiella halophila]	1129	3e-121
NP_567581 abscisic acid 8'-hydroxylase 1 [Arabidopsis thaliana]	1114	1e-119
NP_851136 abscisic acid 8'-hydroxylase 3 [Arabidopsis thaliana]	1027	2e-109
XP_002863488 predicted protein [Arabidopsis lyrata subsp. lyrata]	992	2e-105
NP_974574 abscisic acid 8'-hydroxylase 1 [Arabidopsis thaliana]	983	2e-104

Swiss-Prot top hits (Blast detail)	Score	e value
Q949P1 Abscisic acid 8'-hydroxylase 1	1114	7e-121
Q9FH76 Abscisic acid 8'-hydroxylase 3	1027	8e-111
Q09J79 Abscisic acid 8'-hydroxylase 1	865	5e-092
Q05JG2 Abscisic acid 8'-hydroxylase 1	865	5e-092
O81077 Abscisic acid 8'-hydroxylase 2	800	2e-084

TrEMBL top hits (Blast detail)	Score	e value
A8MRX5 Uncharacterized protein At4g19230.2	983	2e-104
B9N0P8 Predicted protein	969	7e-103
B1B1U1 ABA 8-oxidase	943	7e-100
B9RY37 Cytochrome P450, putative	939	2e-099
B1B1T9 ABA 8-oxidase	924	1e-097

Arabidopsis top hits (Blast detail)	Score	e value
AT4G19230.1 CYP707A1; (+)-abscisic acid 8'-hydroxylase/ oxygen binding	1115	4e-122
AT5G45340.1 CYP707A3; (+)-abscisic acid 8'-hydroxylase/ oxygen binding	1027	7e-112
AT4G19230.2 CYP707A1; (+)-abscisic acid 8'-hydroxylase/ oxygen binding	983	9e-107
AT5G45340.2 CYP707A3; (+)-abscisic acid 8'-hydroxylase/ oxygen binding	907	6e-098
AT2G29090.1 CYP707A2; (+)-abscisic acid 8'-hydroxylase/ oxygen binding	800	2e-085

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


12	1			50%


10	1			50%

Unigene Members	Member information