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Information for unigene UN42922
| FASTA Sequence |
| Unigene ID: UN42922 | Length: 688 |
SSR | | GGGGGGGATTAAAATTGTCATTCTACGTTGTCTGTTTCATTTTAGTGAAAGTGAGCTTCTTTGCTGTATGAGATTCTATGTGCGTC
AGATGCCTTTTGTCTCCGTGGCCTGCTTCTAGCTTTTTTGAGAGGGCTTAGTAAGCGCACCACTTCTGAAGGTCTTAGGACAGCTT
TTACTCAGTTTGGACATGTTGCTGATGCCAAGGTTGCCACAGACAGAGTCTCAGGATATTCAAAAGGGTTTGGCTTTGTTCGTTAT
GCCACCTTAGAAGATTCTGCTAAAGGCATTGCTGGTATGGATGGCAAGTTTCTTGACGGCTGGGTCTTATTCTCAGAGTATGCAAG
ACCAAGAGAGCCATATCGACCTCACAACAACATCCCTCCTCCTCCTCCTTAATGGTAACCGCTATCGAAAGCAAGACGAATCTTTA
TATCAGTGTTGATGCTAGTTTTTATAGTTACCTGGAGTGTGAATCTGACTAATCCCAGGAAGCGGTACTCATCTGCGATAGAAAAA
CAGGAACAATACCAATGTTATTTGTTTTAGATCATAGCACAAAGAGAGACCACTGAATTGGTCAAGCAGATAATGTATTGTGATTC
GTATATATTGCAGTATGATGAAAATGACAAATGTATCCTACATAATATTAGCCATTTTTAACTAATATTATTATACATTCAGATTC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002864345 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] | 404 | 2e-037 |
| NP_200269 RNA recognition motif-containing protein [Arabidopsis thaliana] | 396 | 1e-036 |
| XP_002283144 PREDICTED: hypothetical protein [Vitis vinifera] | 351 | 2e-031 |
| XP_002316957 predicted protein [Populus trichocarpa] | 336 | 1e-029 |
| XP_002319264 predicted protein [Populus trichocarpa] | 335 | 2e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q99070 Glycine-rich RNA-binding protein 2 | 150 | 2e-009 |
| P10979 Glycine-rich RNA-binding, abscisic acid-inducible protein | 148 | 4e-009 |
| Q03878 Glycine-rich RNA-binding protein | 147 | 5e-009 |
| P49311 Glycine-rich RNA-binding protein GRP2A | 146 | 7e-009 |
| Q03251 Glycine-rich RNA-binding protein 8 | 146 | 7e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FIU6 Putative uncharacterized protein | 396 | 1e-036 |
| A5B311 Putative uncharacterized protein | 351 | 2e-031 |
| B9I063 Predicted protein | 336 | 9e-030 |
| A9PGS0 Predicted protein | 335 | 1e-029 |
| B9SY46 RNA binding protein, putative | 328 | 8e-029 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G54580.1 RNA recognition motif (RRM)-containing protein | 396 | 7e-039 |
| AT2G37510.1 RNA-binding protein, putative | 265 | 1e-023 |
| AT1G73530.1 RNA recognition motif (RRM)-containing protein | 190 | 5e-015 |
| AT5G06210.1 RNA-binding protein, putative | 170 | 1e-012 |
| AT3G26420.1 ATRZ-1A; RNA binding / nucleotide binding | 158 | 3e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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