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Information for unigene UN42924

FASTA Sequence
Unigene ID: UN42924Length: 788 SSR 
GGAACCCATCTCTCATTATCTCTCATCTAATCTTCCCCCTTGCAATCACATCTCTAATCTCTGATTCAATGGAAGGCGTTTCCGCT
AATGTGTCGGCATCGACCTTGTCAAACGATGAAGACCTCGTCGTCTCTTGCGAGGATTCTTCTTCTCCGGCAGAGAATGAGCTCGA
GCTTGGTCTCACTTTGAGCCTAGGTCGAGAAAACAGGGTTGCTCACGCTGTTGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGT
CGTCTTCTTTGAGTAGCAGAGCTAGCGTGACTGCTGGGATCAAGAGAACAGCTGATTCGATGGCCGCTACTAGTGGGCAAGTTGTG
GGGTGGCCACCGATAAGGACTTACAGAATGAACAGTATGGTTAACCAAGCCAAGACATTGGCAATGGAAGATCAAGAAGTAAACAA
AAACAGGACCGATGCAACAAAGATGAGAATGTTTGTGAAGGTGACTATGGATGGTCTTCCGATTGGAAGGAAAATCGATCTGAACG
CTCATAGATGCTATGAATCACTGTCCAACACTCTCGAAGATATGTTTCTGAAGCCCAAAACAGATGGTCACCTGGAAGCAGGGGTC
ATTAGGAAGATACTACCAGATGGGTCTTCTGGATTAGTCCTAACATATGAAGACAAGAAGAGATTGGATGCTTGTTGGTGATGTTC
CCTGGGGGATGTTTATTGGTTCTGTCAAAGACTCCGGATAATGAAAACATCAGAGCTACTGGTACAGCTCAAATGATCTATGAAGT
ATAGTATACTCTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34152 unnamed protein product [Thellungiella halophila]7762e-080
XP_002869489 indoleacetic acid-induced protein 11 [Arabidopsis lyrata subsp. lyrata]7681e-079
NP_194593 auxin-responsive protein IAA11 [Arabidopsis thaliana]7449e-077
NP_001078460 auxin-responsive protein IAA11 [Arabidopsis thaliana]7449e-077
NP_001190859 auxin-responsive protein IAA11 [Arabidopsis thaliana]7449e-077

Swiss-Prot top hits (Blast detail)Scoree value
Q38829 Auxin-responsive protein IAA117444e-078
Q8LAL2 Auxin-responsive protein IAA262159e-017
Q9LG86 Auxin-responsive protein IAA22141e-016
Q38831 Auxin-responsive protein IAA132014e-015
O24408 Auxin-responsive protein IAA181961e-014

TrEMBL top hits (Blast detail)Scoree value
A8MR39 Uncharacterized protein At4g28640.27446e-077
D3K0F2 Indole-3-acetic acid inducible 11 (Fragment)4166e-039
B9SQS7 Auxin-responsive protein IAA13, putative2259e-017
B6TJN4 IAA13-auxin-responsive Aux/IAA family member2195e-016
A9PCE3 Putative uncharacterized protein2178e-016

Arabidopsis top hits (Blast detail)Scoree value
AT4G28640.1 IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11); transcription factor7444e-079
AT4G28640.2 IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11); transcription factor7444e-079
AT3G16500.1 PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1); transcription factor2158e-018
AT2G33310.1 IAA13; transcription factor2013e-016
AT2G33310.2 IAA13; transcription factor2013e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information