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Information for unigene UN42932
| FASTA Sequence |
| Unigene ID: UN42932 | Length: 1150 |
SSR | | GGGAGAGTAGTAGCAGAAGAAGAAGAAGAAGAACCAGTTCGATGGCGATGACAGTAGCAGCTTCGTCCTCTGTGGCAGTGATGATT
CCCCGTGTCCCGGCCGTCTCCGCTCGCTTATCCGCCGTTCCTTACCTTCCTCCGCTGCCTCCTCGCTCTTTAGGCCGATCTTCTTT
CACTGTTCCCCTGAAGCTAGTTTCAGGTGACCGGTTCAGTTTCCTAAGTATCTATTTCTCGGTTTAATGGAATCTAGAAATGCCCG
ACAAAACTTGCGTCTTTTCTGTCTGAATTTAGAATATTCCGACCGGAGATTGAGATTCAGCGATGCGGCGGTTCGGTTTAGTTGTT
AAAATCTAAAATTCAATTCGGTTTACCGGTTTATATAATCTGGTATGGATAGTGCAAAGCTACTCCAAAACCAGAAATTGAGATTC
AGCTATGCGGTTCGGTTTAACTGTTAAAATTCTAAAATTCAATTCGATTAACCCGGTTTATAATCTGCTATAGAGAGCGTAAGCTA
ATCCAAACCGGAAATTGAGTAGTTATATAGTTTAATTTCCGTGAATCTAAACCGAAAGATTGGAATTATCCCGGTTCAATGGCAGG
GAACGGTTTACAGAAGGTTGAATTGATGAAGACGAGAGCTTCTTCATCAGACGACACCTCAACGTCCATTGACACCAACGAACTCT
TTACAGACTTGAAGGAAAAGGTAAGAAGCCATTTCTTGAACAGAGTTGTATTGGCTTTGTGTTTTGTTTTTCTTAATTTTCGGTTT
TGGTGAAGTGGGATGGTCTTGAGAACAAAGCAACTGTGGTTATCTATGGAGGAGGAGCCATTGTAGCTGTTTGGTTATCTTCCATT
CTTGTGGGTGCCATCAACTCTGTTCCTCTGCTTCCTAAAGTTATGGAGCTTGTCGGTCTCGGGTACACAGGATGGTTTGTCTACAG
ATACCTTCTCTTCAAGTCAAGCAGAAAGGAGTTGGCTGAGGATATTGATTCCTTGAAGAAGAAGATCGCAGGGACCGAATAGATTC
TTTCATAAAAATAATAAACTTTCTTTCTTTCTGGAGCTTTTCTGTAATGTGATTATTATACAATGTCTCTGTTTTCAACAGTGTAC
CTTCTTCAGTGTGAAAATATTATCTTTGATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACF23021 ST6-40 [Eutrema halophilum] | 405 | 3e-037 |
| NP_567210 uncharacterized protein [Arabidopsis thaliana] | 401 | 1e-036 |
| XP_002874994 hypothetical protein ARALYDRAFT_912116 [Arabidopsis lyrata subsp. lyrata] | 401 | 1e-036 |
| AAB00107 unknown [Arabidopsis thaliana] | 398 | 2e-036 |
| ADN34169 hypothetical protein [Cucumis melo subsp. melo] | 390 | 2e-035 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04616 Uncharacterized protein At4g01150, chloroplastic | 401 | 4e-038 |
| Q8LCA1 Thylakoid membrane phosphoprotein 14 kDa, chloroplastic | 181 | 1e-012 |
| Q119Z5 Glutamyl-tRNA synthetase | 139 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B4YYA4 ST6-40 | 405 | 2e-037 |
| A9PH76 Putative uncharacterized protein | 388 | 2e-035 |
| B9I8T5 Predicted protein | 388 | 2e-035 |
| B9RE13 Thylakoid membrane phosphoprotein 14 kDa, chloroplast, putative | 383 | 8e-035 |
| C6SVQ2 Putative uncharacterized protein | 382 | 1e-034 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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