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Information for unigene UN42952

FASTA Sequence
Unigene ID: UN42952Length: 488 SSR 
GGAGATTGACTTGACCTGCACCAAAGGTATATCCTTTCAAAAAACATCTCGCATCATCTCTATCACGTCAATCTCTCTCGCCCCCT
CTCACTGTGTGTGTGTGAGATCGAAGCTATGTCTCAGACCGTTGTTCTCAGAGTGGCTATGTCATGCGAGGGATGTGTTGGAGCTG
TGAAAAGAGTCCTCGGCAAAATGGAAGGCGTGGAGTCATTTGATGTGGATATAAAGGAGCAGAAGGTGACAGTGAAAGGCAATGTG
CAGCCAGACGCTGTTTTGCAGACTGTGTCAAAAACTGGAAAGAAATCGGCTTTCTGGGACTCAGAGGCTGAAACCGCCAAGGCTTA
AGTATGGAGAAGCAGAGCATCCCATATATATGACTCTGTTTTTTCAATAAAAATCTGTATGGGGATCCTTCTTTCTTTATTTGACT
TGTGTCTGAACATTGCTCTGTGAACCAACCTTGTTTTAATCATTCAAGTAATGTGGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564870 homolog of anti-oxidant 1 [Arabidopsis thaliana]3751e-034
XP_002888491 hypothetical protein ARALYDRAFT_475728 [Arabidopsis lyrata subsp. lyrata]3552e-032
AAT12488 copper chaperone [Populus alba x Populus tremula var. glandulosa]3346e-030
BAJ92563 predicted protein [Hordeum vulgare subsp. vulgare]3346e-030
BAJ88616 predicted protein [Hordeum vulgare subsp. vulgare]3346e-030

Swiss-Prot top hits (Blast detail)Scoree value
Q9TT99 Copper transport protein ATOX11331e-007
Q3T0E0 Copper transport protein ATOX11302e-007
Q9XT28 Copper transport protein ATOX11302e-007
O08997 Copper transport protein ATOX11275e-007
Q9WUC4 Copper transport protein ATOX11213e-006

TrEMBL top hits (Blast detail)Scoree value
Q94BT9 At1g66240/T6J19_63757e-035
A9PCL8 Putative uncharacterized protein3344e-030
A9PIL5 Putative uncharacterized protein3344e-030
Q6J338 Copper chaperone3344e-030
A2YSB2 Putative uncharacterized protein3263e-029

Arabidopsis top hits (Blast detail)Scoree value
AT1G66240.1 ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1); metal ion binding3767e-037
AT1G66240.2 ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1); metal ion binding3167e-030
AT3G56240.1 CCH (COPPER CHAPERONE); copper chaperone3094e-029
AT5G27690.1 heavy-metal-associated domain-containing protein1742e-013
AT5G17450.1 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related1681e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information