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Information for unigene UN42983
| FASTA Sequence |
| Unigene ID: UN42983 | Length: 883 |
SSR | | GGGCAGATCCCTCGTCTTACATCATCTTCCTTGTCCGTCTGTAACTCCTATTTTACTAAACTACCCCTTCAAACCGTTCAAATTAT
CCAGCCTGTCCTTCCCCCATCGCTGCCGTCAGTCTCCAGCATCCTCCTCCTCCTCCGCCGCTCGTTGTTGTTCTTCTTCTTCTTCG
ACGAAAATGGAATCTCCACCGGAAGGTTACAGAAGAAACGTCGGTGTCTGTCTCATGAATCCTTCGAAAAAGATCTTCGCGGCGTC
GAGGTTGGATATTCCCAGTGCTTGGCAGATGCCTCAGGTGTTGTTGTTGTTTATCTCTTGATTCGATTTTTGTGTTTTGTTTTTAG
ATTATCTAAGATAGAATCAGATAAAGAGTAGAATCGGTGTTTGGTATTGGATTGGGTTGATACTTGATAGGGTGGAATCGACGAGG
GTGAAGATCCGAGAGTTGCTGTCATGAGGGAGCTTAAAGAAGAGACTGGTGTTCACTCTGCTGAGATCATCGCTGAGGCACCTCAC
TGGGTGACTTATGATTTCCCTCCAGATGTTAGGGAGAAGCTTAAGGTCCGTTGGGGATCTGACTGGAAGGGCCAAGCTCAGAAGTG
GTTTCTTCTGAAATTTACTGGGGAAGACAAAGAAATCAATCTTCTCGGTGATGGAACTGAGAAACCTGAGTTTGGGGAATGGTCTT
GGGTGTCTCCTGATCAACTCGTTGATCTTGCAGTGGATTTCAAGAAGCCAGTATACAAGGAAGTCATGTCAGCTTTCGCTTCTCAT
CTCCAGTAATACAACAAAACCATATGTTATAACTCACTCACTGCTTTTTAAGTTTTATTTTTTTTGTTTTGGTATCAAACTCGAGG
AATAAGCTCTTCTTGAAATACAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882689 hypothetical protein ARALYDRAFT_317863 [Arabidopsis lyrata subsp. lyrata] | 633 | 8e-064 |
| NP_187673 nudix hydrolase 26 [Arabidopsis thaliana] | 629 | 2e-063 |
| AAF76368 diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase, putative [Arabidopsis thaliana] | 629 | 2e-063 |
| BAH57218 AT3G10620 [Arabidopsis thaliana] | 629 | 2e-063 |
| AAC49902 diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase [Lupinus angustifolius] | 555 | 9e-055 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9CAF2 Nudix hydrolase 26, chloroplastic | 629 | 1e-064 |
| Q9FNH4 Nudix hydrolase 27, chloroplastic | 415 | 7e-040 |
| Q9C6Z2 Nudix hydrolase 25 | 371 | 9e-035 |
| B8H5H3 RNA pyrophosphohydrolase | 278 | 5e-024 |
| Q9A2W6 RNA pyrophosphohydrolase | 278 | 5e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z3D9 AT3G10620 protein | 629 | 2e-063 |
| O04841 Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase | 555 | 6e-055 |
| C6SYK7 Putative uncharacterized protein | 551 | 2e-054 |
| B9HKM5 Predicted protein | 549 | 3e-054 |
| C6TLE9 Putative uncharacterized protein | 549 | 3e-054 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G10620.1 ATNUDX26 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 26); bis(5'-adenosyl)-pentaphosphatase/ bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) | 630 | 7e-066 |
| AT5G06340.1 ATNUDX27 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 27); bis(5'-adenosyl)-pentaphosphatase/ bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) | 415 | 6e-041 |
| AT1G30110.1 ATNUDX25 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 25); bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) | 371 | 8e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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