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Information for unigene UN43003
| FASTA Sequence |
| Unigene ID: UN43003 | Length: 697 |
SSR | | GGACACACAACACTTAACACTTTAATCACACATCACCAACTGGTCTCTCTCATACCAATCTAACCAAATGGGTTCTTATTCTACAC
CTCAAGAAGAGCCTCAACTAGTAGATACACCTGATATTGTTCCTTCTCCGATAGCTCAGGAACCGGACAACGATGTACCGGCCCCG
GGAAATCAGTTTGCTGAGTTCGCCGCCGGTTGTTTCTGGGGGGTGGAGCTTGCTTTCCAGAGGATCCCTGGTGTGACAGAGACTGA
GGTTGGGTACACTCAGGGGATCTCTCACAATCCTTCTTACAAGGATGTTTGCACCAACACAACGAACCATGCAGAAGAAACTAGAG
AAGAAGATTGTGACTGAGATATTACCGGCCAAGAAATTTTACAAAGCTGAGGAATACCATCAGCATTACCTCTCTAAAGGTGGGAC
GAGTGGCCATGCACAGTCCCCTGCAAAGAGCTGCAAAGACCCTATCAGCTGCTTTGGCTAAGGAAAAGCATTTGTTCCTCTTCACC
CAAACAGAGGATTTTTTGAGGTTTCGTATCAGTTTTTTTTGTGTGTGTGTGTGTATGTGCCTGCGTGTGTGTGTGTGTTGATTTTT
AAGTCTCAGTTAGTAATAAAGATGCATGTGGGATCATCTCAACTGTGTAAGTGTAACTTGTCTTAGTTTCTAAACTTTGAACTGAT
GTTTGTTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAR13689 peptide methionine sulfoxide reductase [Brassica oleracea] | 455 | 2e-043 |
| AAR15471 peptide methionine sulfoxide reductase [Olimarabidopsis pumila] | 414 | 1e-038 |
| AAR15485 peptide methionine sulfoxide reductase [Arabidopsis arenosa] | 413 | 2e-038 |
| NP_196363 peptide methionine sulfoxide reductase A2 [Arabidopsis thaliana] | 406 | 1e-037 |
| AAR15454 peptide methionine sulfoxide reductase [Capsella rubella] | 402 | 3e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LY15 Peptide methionine sulfoxide reductase A2 | 406 | 5e-039 |
| Q9FKF7 Peptide methionine sulfoxide reductase A1 | 308 | 1e-027 |
| Q9SEC2 Peptide methionine sulfoxide reductase | 303 | 4e-027 |
| Q9LY14 Peptide methionine sulfoxide reductase A3 | 300 | 1e-026 |
| P54150 Peptide methionine sulfoxide reductase A4, chloroplastic | 294 | 5e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6V5K8 Peptide methionine sulfoxide reductase | 455 | 2e-043 |
| Q6V5E6 Peptide methionine sulfoxide reductase | 414 | 9e-039 |
| Q6V5D2 Peptide methionine sulfoxide reductase | 413 | 1e-038 |
| Q6V5G3 Peptide methionine sulfoxide reductase (Fragment) | 402 | 2e-037 |
| Q6V5J4 Peptide methionine sulfoxide reductase (Fragment) | 327 | 1e-028 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G07460.1 PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 406 | 5e-040 |
| AT5G61640.1 PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 308 | 1e-028 |
| AT5G07470.1 PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 300 | 9e-028 |
| AT4G25130.1 peptide methionine sulfoxide reductase, putative | 294 | 5e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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