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Information for unigene UN43046

FASTA Sequence
Unigene ID: UN43046Length: 1083 SSR 
GGAAAACAAAATCCTTGGCTCCTCTCTCTCGCCCCGAATCTCGCTCTCTCTTGCTTGCGATGGCGAATAATAATCAAGCAAGCCTT
CTTCTCCAGAAGCAGCTCAAAGATCTGTGCAAGAACCCGGTCGATGGTTTCTCTGCTGGTCTCCTTGACGAGAGTAACGTTTTTCA
ATGGAGCGTCTCCATCATGGGTCCTCCTGATACCTTGTAGTGAGTTTTAGTTTGATTGTCTGTGTTTCTGTTTGATTCTATACAGA
ATTGCATATTGTGTGAGGTTGGTTTGGTTGAATTTGCTTAGCTGATTGATTCCATTGTAACATGAATGTTTGTTACATTGTGGTAC
TTTAATTGGTTCTGTTGCTATGTTTGATAGAGGTTGGTTTTGGATGAATTGTTATGGTATTGAAAACTTGATTCTCTGATTGCAGT
GAAGGGGGATTCTTTAATGCAATTATGACGTTTCCAGATAATTACCCTAATCAACCACCAACTTTGCAGTTCACTTCGGAGATGTG
GCATCCTAATGTTTATTCTGATGGTAAAGTTTGCATATCGATTCTTCATCCTCCTGGTGATGATCCTAATGGATACGAGCTTGCCT
CTGAACGTTGGACCGCTGTCCAAACGGTAGAAAGCATTGTGTTGAGTATCATATCTATGCTCTCGGGTCCCAACGATGAGTCACCG
GCTAACGTGGACGCTGCAAAAGAGTGGAGAGACAACAGGGCTGAGTTTAGGAAGAAAGTGAGTCGCTGTGTTAGAAAATCGCAAGA
GATGCTATGAGCGTCTCTTGCTCCCCTGCGTTTTTATCTTTTGTAGAAATTTCTCTCCTAAGCTAAAAGAGAGAGAGAGCGAGCGT
AAGAAGCATCATTCAATCATCAAGAAGCAGCAGCCAGATGAATCTGTGTGCTCAAAATGCTTGTTTTCTTTTTTTCTTTTGGTTTT
GGAGTTGGCTTTAAGGTTTGGAATATTGTGGTGGAATCAAATCCAATCCACCTTTTAGGATTATAATCTTACTCTCGTTAATGGAT
TCGTTTTCACATTCCTTTTTTTTATTTTATTTGATATCATAGCTTTCGACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876298 ubiquitin-conjugating enzyme 14 [Arabidopsis lyrata subsp. lyrata]5845e-058
NP_567020 ubiquitin-conjugating enzyme E2 14 [Arabidopsis thaliana]5783e-057
XP_002312086 predicted protein [Populus trichocarpa]5702e-056
Q42540 RecName: Full=Ubiquitin-conjugating enzyme E2 7; AltName: Full=Ubiquitin carrier protein 7; AltName: Full=Ubiquitin-protein ligase 75666e-056
AAL86003 putative E2, ubiquitin-conjugating enzyme UBC7 [Arabidopsis thaliana]5666e-056

Swiss-Prot top hits (Blast detail)Scoree value
P42747 Ubiquitin-conjugating enzyme E2 145781e-058
Q42540 Ubiquitin-conjugating enzyme E2 75663e-057
Q42541 Ubiquitin-conjugating enzyme E2 135412e-054
P25868 Ubiquitin-conjugating enzyme E2 75181e-051
Q9Y818 Ubiquitin-conjugating enzyme E2 154212e-040

TrEMBL top hits (Blast detail)Scoree value
B9DGG2 Ubiquitin carrier protein5782e-057
B9HMG1 Ubiquitin carrier protein (Fragment)5702e-056
B9SR14 Ubiquitin carrier protein5612e-055
A9P8A7 Ubiquitin carrier protein5602e-055
C6T1V1 Ubiquitin carrier protein5584e-055

Arabidopsis top hits (Blast detail)Scoree value
AT3G55380.1 UBC14 (ubiquitin-conjugating enzyme 14); ubiquitin-protein ligase5798e-060
AT5G59300.1 UBC7 (UBIQUITIN CARRIER PROTEIN 7); protein binding / ubiquitin-protein ligase5672e-058
AT3G46460.1 UBC13 (ubiquitin-conjugating enzyme 13); ubiquitin-protein ligase5422e-055
AT3G57870.1 SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase1334e-008
AT5G50870.1 UBC27 (ubiquitin-conjugating enzyme 27); ubiquitin-protein ligase1317e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

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