Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN43049

FASTA Sequence
Unigene ID: UN43049Length: 742 SSR 
GGGAGAAGACTGTAGTGTTGCTTAGTCGTCGGAGCAACGCACAAGACATAGTACCGACGTGTGCTTCAGATTTACAATGACCCCTC
TTCCTCCTTCATCGGTTCCCTCTCCTACTCCATTTCAACAAATCCTTAATCTCTGATATTACACCCACACACACACACACACAAGA
AGAGACAGTCAGCGACTCTGATCGCGTAAAGGCAGAGCCTTTTTTATATACCCAAGTTAGCAACTTTCCTCAACCTGCGATCTCTG
AATCTCTCTCTCTCCTTTTTCTGAGAGTTCACAGTTCTGTCTTATATTACATTGATGGGTTGCTCCTGGTTCTCTTGCCACAAGAG
TGGAGGAGAACCTTCAGAAGTTCATAGAGAACTTTCAGTGTCAGGCAAGGTAAAGATTTACAAATACAAAGAGCTTCGTCAGGCGA
CCAATGATTTCGATGCCCTGAATAAAATTGGAGAAGGAGGGTTTGGTTCTGTGTACAAGGGCCGTCTTAAAGATGGAAAGATTGCA
GCTATCAAAGTCCTTTCCGCTGAGTCAAGACAAGGCGTGAAAGAGTTCTTGACCGAGATCAACGTCATATCAGAAATACAGCATGA
GAATTTGGTTAAGTTATATGGATGCTGCGTTGAAGGGAGTCACAGGATTCTCGTTTACAACTATATGGAGAACATGAGCCTCGACA
TGACGCTTCTTGCTGGGGGATACATTAAGAGTGGGATACAGTTTGACTGGAGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890180 hypothetical protein ARALYDRAFT_471863 [Arabidopsis lyrata subsp. lyrata]5961e-059
NP_564003 kinase domain-containing protein [Arabidopsis thaliana]5791e-057
AAG10816 Unknown protein [Arabidopsis thaliana]5753e-057
CAN64306 hypothetical protein VITISV_024862 [Vitis vinifera]4884e-047
XP_002268737 PREDICTED: hypothetical protein [Vitis vinifera]4866e-047

Swiss-Prot top hits (Blast detail)Scoree value
C0LGH2 Probable LRR receptor-like serine/threonine-protein kinase At1g561303367e-031
C0LGH3 Probable LRR receptor-like serine/threonine-protein kinase At1g561403351e-030
C0LGE0 Probable LRR receptor-like serine/threonine-protein kinase At1g076503286e-030
C0LGG8 Probable LRR receptor-like serine/threonine-protein kinase At1g534303232e-029
C0LGG9 Probable LRR receptor-like serine/threonine-protein kinase At1g534403232e-029

TrEMBL top hits (Blast detail)Scoree value
Q93YN1 Putative uncharacterized protein At1g166705797e-058
Q9FX80 F19K19.4 protein5752e-057
A5C7M4 Putative uncharacterized protein4883e-047
B9SVD1 ATP binding protein, putative4812e-046
B9I0H9 Predicted protein (Fragment)4596e-044

Arabidopsis top hits (Blast detail)Scoree value
AT1G16670.1 protein kinase family protein5795e-060
AT1G56130.1 leucine-rich repeat family protein / protein kinase family protein3367e-032
AT1G56140.1 leucine-rich repeat family protein / protein kinase family protein3359e-032
AT1G29730.1 ATP binding / kinase/ protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase3322e-031
AT1G07650.1 leucine-rich repeat transmembrane protein kinase, putative3286e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information