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Information for unigene UN43082

FASTA Sequence
Unigene ID: UN43082Length: 707 SSR 
GGAAGGTTAATTGTTTCTTGTTTTAGAAAGATAATGAACCACCAACACCATTTCGTTCCTGACTTCGAGACAGACGATGATTATGT
CAACGCTAACACAAACCCTTCTTCTTCAAATCTTGCAAGAAAACCCATCATAGGTGAACAAGAAGAAGATGGTGATCTCATGGAGC
TTCTATGGCACAACGGTCAAGTAGTTCTCCATAATCAAAGACCCAACGCCAAGAAACAACCTCCTCCTCCTCCTCCGTTCATCCCA
TTCCCAAACATGTTAGCTTCTCAAAGACCTTTACCTCCACAAACTCGCATGGGCGGCTACCCTGCTGTTCAAGCTTCTGATCCATC
AAGAGTGTATGGATCAAACCAGCAGTTTGTTCCAAACTCGAATCAGGCTCCGTATTCTGGTTACATGGATCCGTATCAGCAATTCC
GCAGTCTCCACCCGAGCCAACCACCTCAGTTTCAGAATCAAGCAGCATCGTACCCAAGTTCAAGCAGGGTAAGTAGTACCAAGGAA
TCCGAGGATCAAGGAAACCAAACAACAAGTTGATGAGATCCTGAGCCAAGATGATCTGTTTTCACAAGCAATACACAATTTTGAGA
AAATTGACAGAGAGAAAGAGTTAACATGTACATCGCAGTTTCATATATACATATGTATTATGTTCTTGTTGTTATTCTCTTTTTCG
GATTGTATACTACTTAGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883941 hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp. lyrata]4167e-039
NP_179608 transcription factor PIF1 [Arabidopsis thaliana]3933e-036
NP_849996 transcription factor PIF1 [Arabidopsis thaliana]3933e-036
AAD24380 unknown protein [Arabidopsis thaliana]3933e-036
BAF00716 putative bHLH transcription factor [Arabidopsis thaliana]3933e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q8GZM7 Transcription factor PIF13932e-037
Q8GT73 Transcription factor bHLH1191467e-009
Q9SVU7 Putative transcription factor bHLH0561361e-007

TrEMBL top hits (Blast detail)Scoree value
B9GR94 Predicted protein1522e-008
B9S581 Phytochrome-interacting factor, putative1291e-005

Arabidopsis top hits (Blast detail)Scoree value
AT2G20180.2 PIL5 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 5); DNA binding / phytochrome binding / transcription factor3941e-038
AT2G20180.1 PIL5 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 5); DNA binding / phytochrome binding / transcription factor3941e-038
AT4G28800.1 transcription factor1995e-016
AT4G28811.1 transcription regulator1467e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information