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Information for unigene UN43096

FASTA Sequence
Unigene ID: UN43096Length: 686 SSR 
GGGTCTTAAGCTGTGTACAGAATCAAGTTTCAGAGAGAGAGAGAGAGAGAGAAATTCACAAAGACGACTAAAGAAATCTCAAAGGC
CTCTGAATCATCCAGAAGGTTTTGGTCAAAGAAGAAGATGAACTCTCGCGCGATCTACTCCGTCATCGCGATCCTCGCGCTCGTAA
TCTCAGCCGTCAACGCCAGCGGCGGAGGCTTCGGAGACTCGTTTGATTTCGTACGGAGCGGATCTTCTTCGCTCTTCTCCGGATGC
GAAGGCTCCATCGCTGAGTGTATAGCGGAGGAAGAGGAGATGGAGTTCGATTCAGAGATCAGCAGGCGCATGTTAGCGCAGAAGAA
GTACATTAGCTACGGTGCAATGAGGAAGAACAGTGTACCTTGCTCGCGACGTGGAGCTTCGTATTACAACTGCCAGCGTGGCGCTC
AGGCCAATCCTTACAGCCGTGGATGCAGCACTATTACAAGGTGCAGGCGTTGAAGAGGAAGATGATGTGTACAATTCCTGTTTTGC
CCTTGCGTGTTTGGCTTTATTTTTTTTAATCTTTTTTATTTCCGGGATATATGGGTTTGATTGACACATTGAAAACTATAGTCTTT
GTTACGAAACAAAAAAAGACATATCGTTATTTTTATTTTTGCTGGTTGTTCATATAAATAATATAAAAAAATTCAAAGTTGGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882418 hypothetical protein ARALYDRAFT_477838 [Arabidopsis lyrata subsp. lyrata]5385e-053
NP_566253 ralf-like 22 protein [Arabidopsis thaliana]5351e-052
XP_002874355 hypothetical protein ARALYDRAFT_910810 [Arabidopsis lyrata subsp. lyrata]4283e-040
AAL26478 RALF precursor [Nicotiana tabacum]3575e-032
AAS13437 rapid alkalinization factor preproprotein [Nicotiana attenuata]3477e-031

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9MA62 At3g054905358e-053
Q945T0 RALF3573e-032
Q5QJ47 Rapid alkalinization factor preproprotein3475e-031
A5BUA5 Putative uncharacterized protein3342e-029
Q6TF28 Rapid alkalinization factor 23342e-029

Arabidopsis top hits (Blast detail)Scoree value
AT3G05490.1 RALFL22 (ralf-like 22); signal transducer5364e-055
AT4G15800.1 RALFL33 (ralf-like 33); signal transducer3204e-030
AT1G02900.1 RALF1 (RAPID ALKALINIZATION FACTOR 1); signal transducer3142e-029
AT3G16570.1 RALFL23 (ralf-like 23); signal transducer2873e-026
AT2G33775.1 RALFL19 (ralf-like 19); signal transducer2282e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information