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Information for unigene UN43098
| FASTA Sequence |
| Unigene ID: UN43098 | Length: 801 |
SSR | | GGAGAAAGAAAGGCAGTGCTTAAATGTTTTAAGAGATTCATTGGTTGATTGATAGGGAAAACGTAATCAAGATGGGTTCTTCGTCC
AACGGAGGCGTGCCACCTGGGTTTCGGTTTCATCCGACGGACGAAGAGCTTCTCCATTACTACCTAAAGAAGAAAATCTCTTACCA
GAAGTTTGAGATGGAAGTTATCAGAGAGGTTGACTTAAACAAGCTTGAGCCTTGGGATTTACAAGAGAGATGCAAGATAGGGTCAA
CGCCTCAGAACGAATGGTATTTCTTTAGCCACAAGGATAGGAAATATCCGACGGGATCAGGGACAAACCGTGCTACTCACGCAGGG
TTCTGGAAAGCGACGGGACGTGACAAGTGCATAAGGAACTCTTATAAGAAGATAGGAATGAGGAAGACTCTCGTGTTCTACAAAGG
AAGAGCTCCTCATGGCCAAAAGACTGATTGGATCATGCATGAGTACCGTCTTGAAGATGCTGATGATCCTGAAGGCAACCCTAGTG
AGGATGGATGGGTGGTTTGTAGGGTATTCATGAAGAAGAATTTGTTCAAGGTAGTTAATGACGGTGGTTCAAGCATTAACTCTGCG
GACCAATACAACCATGATGCGTCCAACAACAACAACAAACTCCAAGCTCGTAGCTTTATGCACGGAGACAGTCCTTACCAACTAGT
ACGTAACCACGGAGCCACTACATTCGAACTCAACAAGCCTGACCTTGCTCTTCATCAGTACCCACCTATCTTCCACAGCCACCATC
CCTTGGATTTGACTACTCTTCAGATTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874620 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1222 | 3e-132 |
| NP_192773 protein BEARSKIN1 [Arabidopsis thaliana] | 1220 | 6e-132 |
| XP_002533613 NAC domain-containing protein, putative [Ricinus communis] | 951 | 9e-101 |
| XP_002329178 NAC domain protein, IPR003441 [Populus trichocarpa] | 923 | 2e-097 |
| XP_002319872 NAC domain protein, IPR003441 [Populus trichocarpa] | 919 | 5e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SV87 Protein BEARSKIN1 | 1220 | 3e-133 |
| Q9C878 Protein BEARSKIN1 | 859 | 2e-091 |
| Q9MA17 Protein SOMBRERO | 691 | 6e-072 |
| Q5Z6B6 NAC domain-containing protein 76 | 639 | 6e-066 |
| Q9FWX2 NAC domain-containing protein 7 | 623 | 4e-064 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T5U4 NAC domain-containing protein, putative | 951 | 6e-101 |
| B9N1Q0 NAC domain protein, IPR003441 | 923 | 1e-097 |
| B9I8D1 NAC domain protein, IPR003441 (Fragment) | 919 | 3e-097 |
| A5BPQ6 Putative uncharacterized protein | 885 | 3e-093 |
| C5Y965 Putative uncharacterized protein Sb06g017720 | 802 | 1e-083 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G10350.1 ANAC070 (Arabidopsis NAC domain containing protein 70); transcription factor | 1220 | 2e-134 |
| AT1G33280.1 ANAC015 (Arabidopsis NAC domain containing protein 15); transcription factor | 859 | 2e-092 |
| AT1G79580.1 SMB (SOMBRERO); transcription factor | 691 | 5e-073 |
| AT1G79580.2 SMB (SOMBRERO); transcription factor | 691 | 5e-073 |
| AT1G79580.3 SMB (SOMBRERO); transcription factor | 691 | 5e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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