Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN43102

FASTA Sequence
Unigene ID: UN43102Length: 984 SSR 
GACCACTTTTCTCCTGCCCATTTGATTGGAAACCATCATGTGGGAATAACAGGCCTGGCTTACTCAGATCAAAGTGAGCTCCTTGT
TTCGTATATGGACGAGTTCATCTATCTTTTCAGCCCTGATATGGGGATGGGCCCGAATCCCCCCTCTTCATCTGAGACTGAGAGTG
AGACTGAGGTGACGAGGACGACTGAGAGTGAGACTGAGGTGAGGAGGACGACGCAGCCGCAGGTTTATAAAGAGCACAGTAACCGG
GAAACAGTCAAGGGTGTGGGCTTTTTTGGACCAAAGTGTGAGTATGTGGTTAGTGGTTCTGACTGCGGCAGAATATTTGTTTGGAG
GAAGAAAGACGGAGAGCTTCTACGTGCCATGGAAGCAGATAAACACGTTGTCAACTGTGTGGAGTCTCATCCTCACATGCCACTCA
TTTCTAGTAGTGGGATCGAGACTGACAGCAAAATTTGGACTCCCGGAGGAACTGAGGAACTCGGTTCGCCTCGAAATGCAGAACAG
GCTTCGGTTTCTGGTAACTCTCGTTGGTACGTGTTTTATGATGAAGAGGGAGATGATCATGGACCCGTGTATTATGTGGATGATGA
TGAGGAGGAGGAGGAGGAAGATGAAGATGATTCTGATGATGACAGTTCAGATGATGATGCAAGTGCGGAAGAGGAGGCGGATAGTG
ATGTCGACGTTGAGATTAGGAAGGATAATGATGATGATGATGATAATGATAATGAGAATGATGGTGGTAAGAATGATGTTGATGAT
GATGATGATGTGGAGGACCGGGGATGATAACTTGTATGGACTACATACATGTAAACACAGGATTAACACAGCAAATTACCACAGAA
AAAAGAGGTTTTATAATAGAGTTTAGGACTTTAGGTAGAGATTGGTGTATGTTTTTCCACAATTGTCTTGTAATAGGCTTTGACAG
GAAAAGAAGTGAATGAAACGAAACATTGGGTTTGAGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAB36721 putative protein [Arabidopsis thaliana]6624e-067
CAB37504 putative protein [Arabidopsis thaliana]6033e-060
NP_568042 transducin/WD40 domain-containing protein [Arabidopsis thaliana]6033e-060
AAM61549 unknown [Arabidopsis thaliana]6024e-060
XP_002867089 transducin family protein [Arabidopsis lyrata subsp. lyrata]5811e-057

Swiss-Prot top hits (Blast detail)Scoree value
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745572581e-021
P04929 Histidine-rich glycoprotein2293e-018

TrEMBL top hits (Blast detail)Scoree value
Q9T001 Putative uncharacterized protein AT4g351406623e-067
Q9SZM8 Putative uncharacterized protein AT4g384806032e-060
Q8LF85 Putative uncharacterized protein6023e-060
Q8L862 Putative uncharacterized protein At4g351405673e-056
B9S5H1 WD-repeat protein, putative5485e-054

Arabidopsis top hits (Blast detail)Scoree value
AT4G38480.1 transducin family protein / WD-40 repeat family protein6487e-068
AT4G35140.1 transducin family protein / WD-40 repeat family protein5733e-059
AT3G45620.1 transducin family protein / WD-40 repeat family protein3135e-029
AT5G10940.1 transducin family protein / WD-40 repeat family protein1934e-015
AT5G63740.1 zinc finger protein-related1631e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information