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Information for unigene UN43119
| FASTA Sequence |
| Unigene ID: UN43119 | Length: 541 |
SSR | | GGCTAGCTCGTTGCTCTCTCTCTCTCTATTGCTTCTGCAAAACTCTAACAATGGCAGCTGAAATGATGTTAGTGAAGCCAATCTCC
CAATTCGCATCTCCAAAGCTCACCAACTCGAGGACATGCCTCACCAGCCGACGTTTCTCCACCGTGATCAGAATGTCAGCCACCTC
CACGCCGCCGCCTCCGGCCACCGCAACCTCTAAGTCCAAGAAGGACACGAAGAAGGAGATTAACGAGTCGCTTCTGACACCGAGGT
TCTACACTACGGACTTCGAGGAGATGGAGCAGCTTTTCAACACGGAGATCAACAAGAACCTCAAGAGGATTCCTCTCATTGCTGGT
TTAGTCTCTGAGATCTTGGCTGCTTATCTCATGCCTCCTGTTGAGTCTGGATCTGTTGATTTCGCCGAGTTTGAGTCTAATCTTGT
CTATTAGTAGCTGCATTGTCAAGGCATTAAGTGGACAGATGGTTCTTGATTTGTTTATTGATCTAAATTGAGAAACCTCGTTTATT
GTAATAAACCAAATACTTTTACTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191253 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase [Arabidopsis thaliana] | 375 | 2e-034 |
| AAF63476 putative dicarboxylate diiron protein [Arabidopsis thaliana] | 375 | 2e-034 |
| XP_002876389 hypothetical protein ARALYDRAFT_486137 [Arabidopsis lyrata subsp. lyrata] | 364 | 4e-033 |
| AAO11785 AT103 [Arabidopsis thaliana] | 304 | 4e-026 |
| ACU17152 unknown [Glycine max] | 259 | 6e-021 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M591 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic | 375 | 1e-035 |
| Q945B7 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic | 234 | 3e-019 |
| Q6SJV8 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic | 201 | 2e-015 |
| Q5EFU4 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic | 184 | 2e-013 |
| Q9LD46 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1, chloroplastic | 139 | 3e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6T5W0 Putative uncharacterized protein | 259 | 4e-021 |
| B7FKU6 Putative uncharacterized protein (Fragment) | 210 | 2e-015 |
| Q17UU7 Putative desaturase-like protein | 203 | 1e-014 |
| A9JR07 Putative leucine zipper protein | 191 | 3e-013 |
| Q0IKM3 Leucine zipper protein zip1 | 191 | 3e-013 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G56940.1 CRD1 (COPPER RESPONSE DEFECT 1); DNA binding / magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase | 375 | 1e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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