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Information for unigene UN43127
| FASTA Sequence |
| Unigene ID: UN43127 | Length: 1136 |
SSR | | GACACACACACACTCATAATGGCCACCGTCGCTAACTTCTCAGCCAAACCAATCACCACCGTGATTCCACGTCTGTCATCCGCCGT
TGCCTCCACCTCCTCCTTCGTATTCTTCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTAAAAATCCCTCGAAAA
GAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCGGCGTCACCAGGGAAGGTGGGTACACCGGCGGCGAAGGACGAGAAAGTGCAA
AAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGAACAAGCTTGTGGTTGTGGAGTTTGCCACGAGTAAGAG
TGATCAGAGTAGTAAGATATATCCGTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGACTTCTTGCTCGTCATGGGTGATG
AGTCGGAAAAGACTAGAGAGCTTTGTCGGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATGGAGAAAATA
CACGAGGAAGAAGGCATCGGACCGGACCAGTTAATGGGGGACGTGCTATATTATGGAGACAGCCACTCGGCGGTTGTGCAGCTGCA
TGGACGAGCTGACGTGGATAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCTGATTGTGCTGGATGTCGGTCTGAAACACTGTG
GACCATGCGTGAAGGTTTATCCGACGGTGCTGAAACTGTCCCGGTCGATGTCCGCGTCTGTCGTGTTCGCTAGAATGAATGGGGAC
GAGAATGATAGCTGTATGGAGTTTCTAAAGGACATGAATGTTATCGAAGTACCAACTTTCTTGTTCATCAGGGACGGCGATATTCG
TGGGCGGTATGTTGGTTCCGGTAAAGGAGAACTCATTGGAGAGATTCTCCGGTACTCAGGCGTTCGTGTCACTTACTAATTTGTAT
CAAAACTCAATTGATTCAAAGAATTATGTTTTTGTGGGTTTTGTTTGTACCATCCGATCGAGACCGGTGTGTGATTATTGGTTCGA
TTCTGCTGTGTTATTTTTCCCTTTAACTATGAAGGCACGTAATTTGATATGTCTGGGATACCTGTTCAGTCTGGATCGGGATTTTG
GATTCAATTTCCTAGGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34107 unnamed protein product [Thellungiella halophila] | 1450 | 2e-158 |
| XP_002889056 hypothetical protein ARALYDRAFT_895485 [Arabidopsis lyrata subsp. lyrata] | 1358 | 1e-147 |
| NP_177735 thioredoxin-like protein CDSP32 [Arabidopsis thaliana] | 1343 | 6e-146 |
| AAM63182 chloroplast drought-induced stress protein, putative [Arabidopsis thaliana] | 1343 | 6e-146 |
| XP_002510599 conserved hypothetical protein [Ricinus communis] | 1022 | 9e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SGS4 Thioredoxin-like protein CDSP32, chloroplastic | 1361 | 2e-149 |
| Q84NN4 Thioredoxin-like protein CDSP32, chloroplastic | 942 | 8e-101 |
| Q6Z4I3 Thioredoxin H2-1 | 147 | 1e-008 |
| Q0D840 Thioredoxin H1 | 141 | 6e-008 |
| O96952 Thioredoxin | 138 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9R8F6 Putative uncharacterized protein | 1022 | 6e-109 |
| B9H5C2 Predicted protein (Fragment) | 1001 | 2e-106 |
| O04002 CDSP32 protein (Chloroplast Drought-induced Stress Protein of 32kDa) | 992 | 2e-105 |
| B4FTP2 Putative uncharacterized protein | 940 | 2e-099 |
| C6TLX7 Putative uncharacterized protein | 940 | 2e-099 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G76080.1 CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) | 1362 | 1e-150 |
| AT1G19730.1 ATTRX4; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 146 | 1e-009 |
| AT1G59730.1 ATH7 (thioredoxin H-type 7) | 131 | 7e-008 |
| AT3G17880.1 ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / protein binding | 123 | 6e-007 |
| AT3G17880.2 ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / protein binding | 123 | 6e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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