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Information for unigene UN43143

FASTA Sequence
Unigene ID: UN43143Length: 650 SSR 
GAAGTGAAGTGAGCAGGAACGTGGATCTGGGAGACGAGACGACGACCATGATGTGCAAGTTTGTGGTGAGAGCGTCAGAAGCATCA
ATCACGAAGCAAATAGAGTCAGATGTGCAGGGATGGTGTGATGATCTAACGGACGGGGGAGTTGAGTATATGCCAGAGGATGAAGT
GAAAGCAACAGCAGCTGAGAAACTGAAAATCTCAATGGAGAGAATTGCTTTGTTAAAGGCAGCTCAGCCGAAGAAGACTCCAAAGA
CCCAGGAAGAAAACCAAAGTGAAGAAGAAGAAGATGACGATGAAGAAGAAGATGATGAAGAGAAAGAGAAGAAGGAAAAGGAGAAA
GAAGAGGAGAAGAAGAAGAAGAAAGAAAAGGAAAAAGGAACATTATCCAAGCTGACAGCAGAAGAAACAGAGCACATGGCGCTCCA
GGCAGCAGTGCTCCAAGAATGGCACATGTTGTGCAAAGATAGAAAGTTAACTAAAAACAACTAAGATTTTGTATTCATTCTTTTTG
TGTGTTTGAAGATGTGTTTGTCGTTAAACATGGATGTTTATCTTTTGCTTTCATGTCTGCTATTTTGTATAACATCCAGAAACAGG
GCCGTGTCTATTGTCTGGCATTCAACAAACAGGAAAAGCTTACAAGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884260 hypothetical protein ARALYDRAFT_477337 [Arabidopsis lyrata subsp. lyrata]7321e-075
NP_186827 TPLATE protein [Arabidopsis thaliana]7259e-075
AAF01560 unknown protein [Arabidopsis thaliana]7259e-075
XP_002509557 conserved hypothetical protein [Ricinus communis]5781e-057
XP_002298604 predicted protein [Populus trichocarpa]5627e-056

Swiss-Prot top hits (Blast detail)Scoree value
Q01538 Myelin transcription factor 11458e-009
Q8I5D2 101 kDa malaria antigen1431e-008
P54696 Myosin-H heavy chain1403e-008
P11716 Ryanodine receptor 11385e-008
Q8STA9 UPF0329 protein ECU05_1680/ECU11_00501377e-008

TrEMBL top hits (Blast detail)Scoree value
Q9S7T0 F28J7.11 protein7256e-075
B9RBM3 Putative uncharacterized protein5787e-058
B9GJC8 Predicted protein5625e-056
Q84W49 Putative uncharacterized protein At3g01780 (Fragment)5383e-053
A3C959 Putative uncharacterized protein3913e-036

Arabidopsis top hits (Blast detail)Scoree value
AT3G01780.1 TPLATE; binding7263e-077
AT1G47300.1 F-box family protein1351e-008
AT5G03710.1 unknown protein1261e-007
AT1G29000.1 heavy-metal-associated domain-containing protein1233e-007
AT2G12875.1 unknown protein1233e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information