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Information for unigene UN43154

FASTA Sequence
Unigene ID: UN43154Length: 726 SSR 
GGACTTTAGTTGATTACGGCTTCATAGCTTTGCTTCTTCCATAGATGAACTCGCCGTCTCTGTTTATTCTTAATCTTCAGATTTTC
TCTTCTCATCTCTTCACATTCCCTGAAGATTTCCTCTTCTCATCCCTTCAGAAGACCTTTTACCTTCCTCTTTAACATCCGTGAAG
GGCTCTGAACTCCGTCGTGCCCTACGCCGTGAGCAACCCGATTTTCAGATAGTGAAGCTTGAGGGAAGTAAATATCCAAAAAGAGA
GTTCTTTTTTAGGTTTGTGTATCCTTGTCTTCTCGAGAGGATGGAAGATAAGGGAAAGGGTGTGGTGGGAGAAGATGAGGAAAAGT
CGTTTTCTGTGTTAGAAGGGGGTCCAAGCAATGTGGAAGTAGACGGTGGTGATGTTAGTGGTGATAACTATGATGATGATGATGAT
GATGATGATGATGATGATGATGAAGACGAAAACAGTGATGAAGGAGGCCAGGTACATGATGATGATGATGAGGGAGAGGGAGATGA
GTCAGAAGAAGAAGAAGGGGATGACTCTGAAGCTGGAAGTGGAATTCCTACCACATTGGAACGTCTTGAATATGGAGCTCTGGCTG
AGAAGAAACGCAAAGCACTTGCTGATTCTCGACGTGATGGCTCAGAGAAGAGAGGCAAGTTTGATGACATTAACATCTCGGGCGAG
AAGGAATACATGGAACTCATCTATTCTGGCCGCCGACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890243 hypothetical protein ARALYDRAFT_471977 [Arabidopsis lyrata subsp. lyrata]2366e-018
XP_644032 hypothetical protein DDB_G0274557 [Dictyostelium discoideum AX4]2062e-014
XP_002724689 PREDICTED: hypothetical protein [Rattus norvegicus]1873e-012
XP_002813170 PREDICTED: hypothetical protein LOC100442257 [Pongo abelii]1838e-012
EEE27844 DNA mismatch repair protein, putative [Toxoplasma gondii VEG]1821e-011

Swiss-Prot top hits (Blast detail)Scoree value
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745572068e-016
P04929 Histidine-rich glycoprotein1753e-012
Q17RH7 Putative protein TPRXL1753e-012
Q75JC9 Uncharacterized protein DDB_G02716701692e-011
A9AUT1 Trigger factor1664e-011

TrEMBL top hits (Blast detail)Scoree value
A6ZSY4 Protein involved in the nonsense-mediated mRNA decay (NMD) pathway1934e-013
B9QPF4 DNA mismatch repair protein, putative1828e-012
Q4FX62 Proteophosphoglycan 51828e-012
Q6VBJ3 Epa4p1811e-011
A8P068 Predicted protein1792e-011

Arabidopsis top hits (Blast detail)Scoree value
AT1G17680.1 transcription factor-related2945e-027
AT1G17680.2 transcription factor-related2945e-027
AT3G10810.1 zinc finger (C3HC4-type RING finger) family protein1781e-013
AT5G37430.1 unknown protein1521e-010
AT2G22080.1 unknown protein1484e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information