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Information for unigene UN43178
| FASTA Sequence |
| Unigene ID: UN43178 | Length: 628 |
SSR | | GGAGGAGGAAGAAGAAGAAGAAGAAGAAGATGAGAGAGACGGTGAAGTTGATAAGCATGGAGGGTTTCGAGTTCGTGATCGACAAG
GAAGCCGCCATGGTTTCACAGACTATAAGAAGCATGCTCACTTCTCCAGGTGGGTTTTCGGAGTCGAAAGATGGCGTGGTGACTTT
CCCTGATATCAGCACAACAATTCTTGAGAAGATTTGCCAGTACTTCTATTGGTCTCTTCAATACTCCAGTAAAGTTTCCATCTTTA
GGAGTCTCTTGTGCCATTGCAGTGTTAAAGAGGCAAAGAGACCGAGTTCCACATTGAGCCTGAGCTGACCTTGGAGCTCATGATGG
CTGCTAATTATCTTCACACTTGAAAGAGCTTATTAACATTATTAAACTCTTTATTCTGGGTAGTCTAGTTTTTCTTTGTAACCATA
AGTTGTGAATCCCCCGGAGCACTTCGTGTGGGGTTATTATAAGTGTAAGCGTTTGACTCAAAAATGGTTTGTGCTTTAACTATTGA
ATAGCTCCGATGGATAGTTGTTCTTTTTTATTTACTAGTTATGACTATTGACCGCACCATCAATGTTCTTGTGGGGTTTTTAGTTG
TTGCCTTTCAAACAGCTTAAGTTAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568900 transcription elongation factor B, polypeptide 1 [Arabidopsis thaliana] | 353 | 1e-031 |
| XP_002520493 Transcription elongation factor B polypeptide, putative [Ricinus communis] | 299 | 2e-025 |
| XP_002314149 predicted protein [Populus trichocarpa] | 293 | 1e-024 |
| XP_002282124 PREDICTED: hypothetical protein [Vitis vinifera] | 292 | 1e-024 |
| ACU13523 unknown [Glycine max] | 289 | 3e-024 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9USX9 Elongin-C | 171 | 7e-012 |
| Q2KII4 Transcription elongation factor B polypeptide 1 | 160 | 1e-010 |
| Q15369 Transcription elongation factor B polypeptide 1 | 160 | 1e-010 |
| P83940 Transcription elongation factor B polypeptide 1 | 160 | 1e-010 |
| P83941 Transcription elongation factor B polypeptide 1 | 160 | 1e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FIG0 Putative elongin protein | 353 | 8e-032 |
| B9S3C4 Transcription elongation factor B polypeptide, putative | 299 | 1e-025 |
| B9HPC0 Predicted protein | 293 | 7e-025 |
| C6SWA0 Putative uncharacterized protein | 289 | 2e-024 |
| C6T083 Putative uncharacterized protein | 285 | 6e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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