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Information for unigene UN43188
| FASTA Sequence |
| Unigene ID: UN43188 | Length: 881 |
SSR | | GTATATAATATAGCATTGTTTTTTTGTTCTTTCCTGGTTTGGTAAATAAATAAGAAAACAAACTACCAATCACAATCCAAAGGTTT
GGTTACTTTGTTAGAAACAAGTCAAAAACAACTTATCCATAATTTCTCACAAGTAGCAAAAGCAGATCGATCATTAAAATAATAAA
CCAACATTTTTAGACACCAGACGTTTTCTCCTGTGTGCTTGCCATTGCTTCCTTTAGGAGTTTCTCAGTCAATTCTTTAGGCAGAC
CCATGACGCTATCTATTGTCCCAACCATTTCTTTGACGCATGGCGAGATTAGAGGATGTTCGATTAGGAGTGCACCAGCCACCTTA
AGCACCATGCCTTCCTCAATCAGTTTCGCGATAATCTCCTCCGATATTTCGTTGAAATAGATCTCCACTCTATCGACGCCTCCTTT
TCTGAATCCTGTTTTGGTATTTGTTACAACCACAGAACTGACTGTTGCTGTGTGTCCCTTGGAATAGCCTCTTATGTATTCCCTTG
CTTCTTCCACACTCGAGGGTTTCTCCCTAACGGCATTTGCATAGACGACAACTTGGTCACAAGTAACAAGTAAGGTCTCCTTTATG
TCGTCGTCATCAGCCATCCGCTGCATGATTGCTTCAGCCTTTGCCTCAGCTAAAGCTAAAACCAACTCTTCAGGATTCTGCTTACG
GATGCTTTTCTCGTCAATATCAGCACTCATTAGAGTGAATTGGTATCCCATGTCTGTTAATATACTTCGTCGAGCAATCGATGAAG
ATCCCAAAACCAGCTTGAAGTGAGGAGGAGGAGGAGAACTCGATTCCATTTTTCTTCCGCTATGTAAGTAGGTAGGTCAAAACGAG
AGATATTTGAAGTGAGGACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865485 hypothetical protein ARALYDRAFT_331123 [Arabidopsis lyrata subsp. lyrata] | 851 | 4e-089 |
| NP_199091 Maf-like protein [Arabidopsis thaliana] | 850 | 5e-089 |
| ACU21322 unknown [Glycine max] | 676 | 8e-069 |
| XP_002281383 PREDICTED: hypothetical protein [Vitis vinifera] | 649 | 1e-065 |
| NP_001150369 LOC100283999 [Zea mays] | 622 | 1e-062 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54TC5 Maf-like protein DDB_G0281937 | 383 | 3e-036 |
| Q6N181 Maf-like protein RPA4527 | 198 | 1e-014 |
| Q130J6 Maf-like protein RPD_4276 | 186 | 2e-013 |
| Q2IRX7 Maf-like protein RPB_4346 | 184 | 4e-013 |
| Q9EWV6 Maf-like protein SCO4923 | 180 | 1e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6THM0 Putative uncharacterized protein | 676 | 6e-069 |
| B6TNZ3 Maf-like protein CV_0124 | 622 | 1e-062 |
| Q10PL9 Maf family protein, putative, expressed | 617 | 4e-062 |
| B8AJL7 Putative uncharacterized protein | 616 | 5e-062 |
| B9F6L8 Putative uncharacterized protein | 616 | 5e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G42770.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf family protein (TAIR:AT5G66550.1); Has 4061 Blast hits to 4057 proteins in 1128 species: Archae - 23; Bacteria - 2744; Metazoa - 45; Fungi - 50; Plants - 61; Viruses - 0; Other Eukaryotes - 1138 (source: NCBI BLink). | 850 | 2e-091 |
| AT5G66550.1 Maf family protein | 556 | 3e-057 |
| AT2G25500.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf family protein (TAIR:AT5G66550.1); Has 693 Blast hits to 693 proteins in 244 species: Archae - 0; Bacteria - 474; Metazoa - 0; Fungi - 5; Plants - 50; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). | 236 | 3e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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