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Information for unigene UN43206

FASTA Sequence
Unigene ID: UN43206Length: 1370 SSR 
GACGAGCCGTAACATCAAGGCGATGAATCTGAACTCGATGAGCTTAGCTATGGAGGAAGGCGAGGGGAGAGGAAAAGAGGTTGAGG
AGAATGAGTTTGTTGAGCAGGGGAAGGAGGAGATGAACGTGAGTCCTAACTCGGTTCTTGATTTGGGGAAGCAATGGGGGAGAGAT
TGGTGGTGGAAGCAAGAAGGGAGTGGTGAGTTGTGTAGTAAAGATTACGTTAGGGAATGGATAGGGAGTCAGATTCACAACAACAC
CGAGGAGAATCCGGATTGGGATGATGATGAGAAGAAGATCATCAGTGGCACTACTCCTGAGCTGGGAGCTTCAACTAGGACAATAG
ATAAAGCAGAGTCTGGTCTGAATGAATCTAGGTTTGATACTCTTCAAGAGAAGTTTGCAGAGGAAGAGACACACAAAAAATCGAAA
AAGAAGAAGAAGAAGCATAGGAACATGGAGGAATGGTGGAAAGAGGAAGAACATAACAACAAAAACAAGATCAGAGTCTTGAGAGT
CAAGTTCAAGAACCGTCTAAGAGTCCCACATTTTCGTTACTGCTTCCACGGTAAAGGCGAAAACACCGTGGAAGACCGAGGAGAAG
GAGGAGAAGCAGCTGCTGGGAGAGTTCAGCTTCAGAAGAGGATGGAGAAGGAAAAGCAGCAGCAGCAGCAACAACAAGAACAAGAA
GAAGAACAAATCAATAGGGAGCGAGATGTGGAGTGGAGACTTGTTCAGCAGAGAGCTAAGCAGCACTACGAGCATGAGAGGGACAT
TGTGTTACATAGCGCCAGAGTACGGAGGAGGAGGTTGCTGTTACTTGATGGAGAAAGGAGATATCTACAGCTTCGGAGTACTGATT
CTAGTGATCATCTCAGGTAGGAGGCCTTTGCACGTCCTTGCATCGCCGATGAAGCTTGAGAAAGCCAACTTGGTGAGCTGGTGTAG
GCAGTTGGCTCAGTCAGGGAACGTTCTCGAGCTGGTGGACGAGAGATTGAAGGATTTGTATAACAAGGAAGAAGCGGGACTGTGCA
TTAACTTGGCTTTGGCTTGTCTGCAGAAAGCGCCTGAGTTAAGGCCTGATATTAGTGAAGTTGTGAGGATCTTGAGAGGTGAAATG
GACATCTCCTCGGCTGCTTTCGAGTTTTCGCCATCGCCTCCTGCAAAAATTTATGGCAGTAGATCAAAGCGGAGAAGCTATAACAG
AGAGAGCATTGCAGAGTATTATTAGTTCTTTTTTGGTTGGTGTTTTCTTTCTGAAAATTGTTTTGAGTTTTTGTTGAGAATTGTGT
TATGACTTGTAATGTTTGTAAACTATGCAAACTCCATCAAAACGCAGAAGAATGTATATCAAATTATAGAGTTCAGCTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_178202 protein kinase-like protein [Arabidopsis thaliana]9172e-096
XP_002889270 kinase family protein [Arabidopsis lyrata subsp. lyrata]8697e-091
XP_002512727 protein with unknown function [Ricinus communis]7236e-074
XP_002303855 predicted protein [Populus trichocarpa]6951e-070
CAN78116 hypothetical protein VITISV_001341 [Vitis vinifera]6932e-070

Swiss-Prot top hits (Blast detail)Scoree value
C0LGE0 Probable LRR receptor-like serine/threonine-protein kinase At1g076502242e-017
C0LGG7 Probable LRR receptor-like serine/threonine-protein kinase At1g534202232e-017
C0LGG9 Probable LRR receptor-like serine/threonine-protein kinase At1g534402223e-017
C0LGG8 Probable LRR receptor-like serine/threonine-protein kinase At1g534302205e-017
Q0WVM4 Probable LRR receptor-like serine/threonine-protein kinase At2g239502062e-015

TrEMBL top hits (Blast detail)Scoree value
Q9SAH3 F23A5.23 protein9171e-096
B9RGL8 Putative uncharacterized protein7234e-074
B9GVL5 Predicted protein6957e-071
A5ANX6 Putative uncharacterized protein6931e-070
B9N9X6 Predicted protein6714e-068

Arabidopsis top hits (Blast detail)Scoree value
AT1G80870.1 protein kinase family protein9177e-099
AT2G45590.1 protein kinase family protein4052e-039
AT4G25390.1 protein kinase family protein3657e-035
AT5G51770.1 protein kinase family protein3371e-031
AT1G07650.1 leucine-rich repeat transmembrane protein kinase, putative2242e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information