 |
Information for unigene UN43219
| FASTA Sequence |
| Unigene ID: UN43219 | Length: 598 |
SSR | | CTCATATCATGGCTTCGCTTCCTGTCCACTTCTCCAGGAATCATCTCTCTTCGCCCAATTTCTCCGACAGATTCCGCCGTTCCGCG
GAGCGGAGATCTTTCGTAGCTCTTGTACACTGCTCTGCTAGAGAAAATGATCGAGGAATCAAGAAGACTTTGTTTCCTGTGAAGGA
GCTTGGATGTTTAGCTTGCGCCGCTCTTTCTGCTTTCACTCTCACAATGGCCTCTCCTGTCATTGCTGCTGACGTGTCTGAAGTCG
TTATGTCTAAAGCTTACGCCGTTGGAGCTAGCTTCAAGGGAGTGAATTTCTCGAATGCCGTTATCGATCGGGTGAACTTCGGGAAG
TCGGATCTAAAAGGGGCTGTGTTCAAGAACACGGTGTTGTCAGGTTCCACATTCGAGGAGGCAAACCTGGAGGATGTGGTCTTTGA
GGACACCATCATTGGTTACATAGACCTTCAGAAGATATGCAGGAACGTGACAATAAACGAAGAAGGAAGACTCGTCTTGGGTTGCA
GATAAAGAGATGAAGAGACTAAAGGGTTTTGGATTTGGTGTGTGTGTGTAAGAATTTGAGAGTTGACACAAAAGAATGTGTG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_851183 thylakoid lumenal protein [Arabidopsis thaliana] | 430 | 1e-040 |
| NP_200161 thylakoid lumenal protein [Arabidopsis thaliana] | 430 | 1e-040 |
| XP_002865974 thylakoid lumenal 17.4 kDa protein, chloroplast [Arabidopsis lyrata subsp. lyrata] | 430 | 1e-040 |
| NP_001190531 thylakoid lumenal protein [Arabidopsis thaliana] | 430 | 1e-040 |
| XP_002318440 predicted protein [Populus trichocarpa] | 398 | 6e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P81760 Thylakoid lumenal 17.4 kDa protein, chloroplastic | 430 | 6e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9I1Y5 Predicted protein | 398 | 4e-037 |
| B9SJT2 Thylakoid lumenal 17.4 kDa protein, chloroplast, putative | 395 | 1e-036 |
| B7FHD5 Putative uncharacterized protein | 391 | 3e-036 |
| A2Z925 Putative uncharacterized protein | 373 | 3e-034 |
| B4FHA0 Putative uncharacterized protein | 373 | 3e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G53490.2 thylakoid lumenal 17.4 kDa protein, chloroplast | 431 | 5e-043 |
| AT5G53490.1 thylakoid lumenal 17.4 kDa protein, chloroplast | 431 | 5e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
