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Information for unigene UN43324

FASTA Sequence
Unigene ID: UN43324Length: 1142 SSR 
ACAAAACCCATAAAACGATTTTAGATAAGCTTCAAATATTTACAGTGTAGTAAAAGAAGTAAAGAGCATTCTCTCCCATAGTATAT
GATGAAACCGCAACAATAAAACAAAAGACAGCAACCAAAAAGAAAGCCCTAGAGAGAAAAAAAACATTACAAGAACCAAGAAGCAT
ACATAAACTGCATAAGAACGATATAGCTTCTGCTTCTTCCTTATACTTGCTTCACAAGTAACTCAGACTTGCAAAACCCCACAAAC
AAAAAAAAACTGTAATAACGTAATGTGGAAAGAGAGAGTCTAAACAGGTTTGTTTCTTTGCATCTCCTTCGGATCTTGATGTCTTG
CAGCAAGTCCAGTAGCTTCAGAGGTTTTCATCACCCTAAGCCTTTTCACTGAGGTGATGAACATTCTCCATGGGACATCACCAACA
AGCATCCAATCTCCTTCCTTATCTTCATAAGTAAGTACAAACTCAGAAGAAGATCCATCTAAAAGCCTCAACGGTTTGGTGAACTG
ACCCGTTTACCCGATAGTACCGGGACTAGTTCGAAAGAACATATCTTCCAGTGTCTGCGCCAAATTCTCGTAAGAAGAATGAGCAC
TCAAATCAACTTTCCTTCCTATAGCAACTCCATCCATGTTCACTTTGATAACCCAACTTGCACTTTTCCATTCACTTTCTTTGTAA
CAACATCTTTAGTCTCATCATCTTTGGCTTTCTTCTTAACATCTTCTTCTTCTTCTTCCCTAGCTGACTTTGTGGCTTGGTTATTA
ACCAAACTGTTCATCCTGTGAGATCCAATAGGTGGCCATCCCACAACTTGACTTGAACGAGGAGGAGATGCACCAGCGTGAGAAGC
AGAGTCGGCAGGTCGTTTAGAGCCAACTGAAGGAAAATCTTTTGCAGTCAAAAGCCTCCCACGCTCTCCCCACGCGCCGCCACCAC
CTGGTTTAACAATCTTGGCCGCTGTTCCACCGCCAAGGCTGAGCCCTAGACCCAGTTCTAGCTCGCTCTCAGCTTTCCCCATCTCA
AGTTCAGTAATCATTTTAGAGAGCACAAAAAAAACTCACCAAGAAAGAGCTCTAAGAATCCAAAACCAAACACAAAAGAGATAGAT
AGAGTATGTTAGAAGTCAAGGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180889 auxin-responsive protein IAA13 [Arabidopsis thaliana]5873e-058
NP_850205 auxin-responsive protein IAA13 [Arabidopsis thaliana]5756e-057
ADB93622 indole-3-acetic acid inducible 13 [Arabidopsis thaliana]5756e-057
ADB93620 indole-3-acetic acid inducible 13 [Arabidopsis thaliana]5756e-057
ADL70631 indole-3-acetic acid inducible 13 [Arabidopsis thaliana]5756e-057

Swiss-Prot top hits (Blast detail)Scoree value
Q38831 Auxin-responsive protein IAA135753e-058
Q38830 Auxin-responsive protein IAA124203e-040
Q38829 Auxin-responsive protein IAA113281e-029
A2XB18 Auxin-responsive protein IAA103226e-029
Q0DWF2 Auxin-responsive protein IAA103226e-029

TrEMBL top hits (Blast detail)Scoree value
D3K0G2 Indole-3-acetic acid inducible 13 (Fragment)5754e-057
Q0WU05 Auxin regulated protein5754e-057
B9SQS7 Auxin-responsive protein IAA13, putative4232e-039
A9PCE3 Putative uncharacterized protein4025e-037
B9HSU7 Predicted protein4025e-037

Arabidopsis top hits (Blast detail)Scoree value
AT2G33310.1 IAA13; transcription factor5871e-060
AT2G33310.3 IAA13; transcription factor5871e-060
AT2G33310.2 IAA13; transcription factor5752e-059
AT1G04550.2 IAA12 (AUXIN-INDUCED PROTEIN 12); transcription factor/ transcription repressor4212e-041
AT1G04550.1 IAA12 (AUXIN-INDUCED PROTEIN 12); transcription factor/ transcription repressor4005e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

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