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Information for unigene UN43365
| FASTA Sequence |
| Unigene ID: UN43365 | Length: 872 |
SSR | | TTTAGGAGTTTCTCAGTCAATTCTTTAGGCAGACCCATGACGCTATCTATTGTCCCAACCATTTCTTTGACGCATGGCGATATTAG
AGGATGTTCGATTAGGAGTGCACCAGCCACCTTAAGCACCGTGCCTTCCTCAATCAGTTTCGCGATAATCTCCTCTGATATTTCGT
TGAAGTAGATCTCCACTCTATCGACGCCTCCTTTTCTGAATCCTGTTTTGGTATTTGTTACAACCACAGAACTGACTGTTGCTGTG
TGTCCCTTGGAATAGCCTGTGTGTGTGTGTGTGTTTTGAAGCCTTGAGAATTGTAATTAAAACAAAGTAAAAGGAAGGAGCTTGTT
TGCTTTACTTGCCTCTTATGTATTCCCTTGCTTCTTCCACACTCGAGGGTTTCTCCCTAACGGCATTTGCATAGACGACAACCTTC
ATAAACCCATTAAAATTCAACTAAACTAATTCAAGATCCACCAAAATACCATTTATAAAACAACCTAAACAAAGCTATAAATAAGT
AACTAAAAAGTAATTTCAGAAATGGTTGTCCAATAAAACATTACTTGGTCACAAGTAACAAGTAAGGTCTCCTTTATGTCGTCGTC
ATCAGCCATCCGCTGCATGATTGCTTCAGCCTTTGCCTCAGTTAAAGCTAAAACCAAGTCTTCAGGATTCTGCTTACGGATGCTTT
TCTCGTCAATATCAGCACTCATTAGACTGAATTGGTATCCCATGTCTGTTAATATACTTCTTCGAGCAATCGATGAAGATCCCAAA
ACCACCTTGAAGTGAGGAGGAGGAGGAGGACTCGATTCCATTTTTCTTCTGCTATGTAGTAGGTAGGTCAAAACGAGAGATACTTG
AAGTGAAGACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865485 hypothetical protein ARALYDRAFT_331123 [Arabidopsis lyrata subsp. lyrata] | 399 | 1e-036 |
| BAB10633 unnamed protein product [Arabidopsis thaliana] | 397 | 2e-036 |
| NP_001190455 Maf-like protein [Arabidopsis thaliana] | 397 | 2e-036 |
| AAM13078 unknown protein [Arabidopsis thaliana] | 397 | 2e-036 |
| NP_199091 Maf-like protein [Arabidopsis thaliana] | 397 | 2e-036 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54TC5 Maf-like protein DDB_G0281937 | 185 | 3e-013 |
| Q5QZ35 Maf-like protein IL1346 | 121 | 8e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8RWH7 Putative uncharacterized protein At5g42770 | 397 | 1e-036 |
| Q9FMY8 Genomic DNA, chromosome 5, P1 clone:MJB21 | 397 | 1e-036 |
| B9IBF9 Predicted protein | 337 | 1e-029 |
| C6THM0 Putative uncharacterized protein | 323 | 5e-028 |
| C5WRQ8 Putative uncharacterized protein Sb01g041990 | 303 | 1e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G42770.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf family protein (TAIR:AT5G66550.1); Has 4061 Blast hits to 4057 proteins in 1128 species: Archae - 23; Bacteria - 2744; Metazoa - 45; Fungi - 50; Plants - 61; Viruses - 0; Other Eukaryotes - 1138 (source: NCBI BLink). | 397 | 7e-039 |
| AT5G66550.1 Maf family protein | 270 | 4e-024 |
| AT2G25500.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf family protein (TAIR:AT5G66550.1); Has 693 Blast hits to 693 proteins in 244 species: Archae - 0; Bacteria - 474; Metazoa - 0; Fungi - 5; Plants - 50; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). | 212 | 2e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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