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Information for unigene UN43388

FASTA Sequence
Unigene ID: UN43388Length: 677 SSR 
GCGTGTAACCATAGAAAGCTTTTATGACTTAACCAGTTGGGCACAGACCAGATCCAAGGATACAAAATATGTGTAAAAAAGAAGTT
TTGAAATGAGAACAACTGTTGTTAAAAAAAAGGAATAGGAACAACTACGAATGTGTTCTTTTCCTTGTGCGCACACCCCTAAATGT
TATTCAGGAAAAACAGAAACCTCCTCCTCCTAGCAGATCGCCACATCCAGATAATCTCCAATCTCGAAATGAAGGTCAGCGAGTGT
TTTACTGTCGTCTGGTTGTTTTCGGTTTGGATAAGACATCGTCTGACCAACCTGTCTGACAATAAAGCGGCCATTCTTGTCTGGAT
AAACAAACGCAAACGATAATCTCGCATCTCTTCTCCTAGCTGCCACAGAAACCTCTTTGACCAAATCTGTTAGCTCGCGAAGATTG
GCATCTTTCCAAGTGTAAATCTGAACTTCGTCCTTTGGCTCTTTGCCCCTCACAGCATAATCTTCCTTAGTATGATGACCACCACT
CTTGGTGAACACACGAAGAAGCAGGGGACACGTCTTCTCGCGATCGACAGGTTCGGCTTTAGGGCAAGGGGGTTGATTAACGCCTC
TCGGAGGAGGCGGCGGAAACGGCCTCCCACCACCACCTTGACTTCTCGCTGTTTCAGCCATCTCTCTCTCTCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882023 hypothetical protein ARALYDRAFT_904009 [Arabidopsis lyrata subsp. lyrata]6702e-068
NP_566050 histone deacetylase complex subunit SAP18 [Arabidopsis thaliana]6523e-066
AAM67239 sin3 associated polypeptide p18 [Arabidopsis thaliana]6461e-065
NP_001189753 histone deacetylase complex subunit SAP18 [Arabidopsis thaliana]6229e-063
XP_002277566 PREDICTED: similar to Os02g0122000 [Vitis vinifera]5592e-055

Swiss-Prot top hits (Blast detail)Scoree value
O64644 Histone deacetylase complex subunit SAP186521e-067
Q3T022 Histone deacetylase complex subunit SAP183188e-029
O00422 Histone deacetylase complex subunit SAP183188e-029
Q5RDT5 Histone deacetylase complex subunit SAP183188e-029
O55128 Histone deacetylase complex subunit SAP183171e-028

TrEMBL top hits (Blast detail)Scoree value
Q6V9I5 P185563e-055
C6T2R6 Putative uncharacterized protein5383e-053
B9RDH5 Histone deacetylase complex subunit SAP18, putative5341e-052
B9GPT2 Histone deacetylase complex protein5204e-051
A2X0A2 Putative uncharacterized protein5115e-050

Arabidopsis top hits (Blast detail)Scoree value
AT2G45640.1 SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18); protein binding / transcription regulator6521e-068

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information